1. Home
  2. Species
  3. Solanum pennellii
  4. Sequence
  5. Sopen02g019010

Sopen02g019010


Description : S25 ribosomal protein


Gene families : OG_42_0001610 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001610_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen02g019010
Cluster HCCA clusters: Cluster_84

Target Alias Description ECC score Gene Family Method Actions
172404 No alias Ribosomal protein S25 family protein 0.11 Orthogroups_2024-Update
At2g21580 No alias 40S ribosomal protein S25-2... 0.05 Orthogroups_2024-Update
At4g34555 No alias 40S ribosomal protein S25-3... 0.04 Orthogroups_2024-Update
Bradi3g42900 No alias Ribosomal protein S25 family protein 0.21 Orthogroups_2024-Update
Bradi4g38580 No alias Ribosomal protein S25 family protein 0.22 Orthogroups_2024-Update
Brara.A00031.1 No alias component *(eS25) of small ribosomal-subunit (SSU) proteome 0.13 Orthogroups_2024-Update
Brara.C04140.1 No alias component *(eS25) of small ribosomal-subunit (SSU) proteome 0.14 Orthogroups_2024-Update
Brara.D01272.1 No alias component *(eS25) of small ribosomal-subunit (SSU) proteome 0.23 Orthogroups_2024-Update
Brara.F03876.1 No alias component *(eS25) of small ribosomal-subunit (SSU) proteome 0.04 Orthogroups_2024-Update
Brara.H01813.1 No alias component *(eS25) of small ribosomal-subunit (SSU) proteome 0.08 Orthogroups_2024-Update
Brara.I04632.1 No alias component *(eS25) of small ribosomal-subunit (SSU) proteome 0.19 Orthogroups_2024-Update
Cre08.g382500 No alias Ribosomal protein S25 family protein 0.11 Orthogroups_2024-Update
GRMZM2G057608 No alias Ribosomal protein S25 family protein 0.08 Orthogroups_2024-Update
GRMZM2G084868 No alias Function unknown 0.09 Orthogroups_2024-Update
GRMZM2G139349 No alias Ribosomal protein S25 family protein 0.09 Orthogroups_2024-Update
Glyma.04G011100 No alias Ribosomal protein S25 family protein 0.19 Orthogroups_2024-Update
Glyma.06G011000 No alias Ribosomal protein S25 family protein 0.06 Orthogroups_2024-Update
Glyma.11G115400 No alias Ribosomal protein S25 family protein 0.15 Orthogroups_2024-Update
Glyma.12G041300 No alias Ribosomal protein S25 family protein 0.12 Orthogroups_2024-Update
HORVU4Hr1G001220.3 No alias component *(eS25) of small ribosomal-subunit (SSU) proteome 0.16 Orthogroups_2024-Update
Kfl00347_0040 kfl00347_0040_v1.1 (at4g39200 : 89.0) Ribosomal protein S25 family protein;... 0.07 Orthogroups_2024-Update
LOC_Os08g44480 No alias 40S ribosomal protein S25, putative, expressed 0.03 Orthogroups_2024-Update
LOC_Os09g39540 No alias 40S ribosomal protein S25, putative, expressed 0.06 Orthogroups_2024-Update
LOC_Os11g05562 No alias 40S ribosomal protein S25, putative, expressed 0.04 Orthogroups_2024-Update
MA_104137g0010 No alias (at2g21580 : 130.0) Ribosomal protein S25 family... 0.05 Orthogroups_2024-Update
MA_10430279g0010 No alias (at4g34555 : 128.0) Ribosomal protein S25 family... 0.02 Orthogroups_2024-Update
Mp4g06120.1 No alias component RPS25 of SSU proteome 0.07 Orthogroups_2024-Update
PSME_00018601-RA No alias (at2g21580 : 128.0) Ribosomal protein S25 family... 0.14 Orthogroups_2024-Update
Potri.004G157200 No alias Ribosomal protein S25 family protein 0.1 Orthogroups_2024-Update
Potri.009G118900 No alias Ribosomal protein S25 family protein 0.12 Orthogroups_2024-Update
Pp1s21_4V6 No alias 40s ribosomal protein 0.19 Orthogroups_2024-Update
Pp1s26_213V6 No alias 40s ribosomal protein 0.16 Orthogroups_2024-Update
Pp1s30_212V6 No alias 40s ribosomal protein 0.06 Orthogroups_2024-Update
Pp1s36_84V6 No alias 40s ribosomal protein 0.16 Orthogroups_2024-Update
Pp1s59_8V6 No alias 40s ribosomal protein 0.02 Orthogroups_2024-Update
Seita.2G134200.1 No alias component *(eS25) of small ribosomal-subunit (SSU) proteome 0.23 Orthogroups_2024-Update
Seita.6G248800.1 No alias component *(eS25) of small ribosomal-subunit (SSU) proteome 0.34 Orthogroups_2024-Update
Sobic.003G322400.1 No alias component *(eS25) of small ribosomal-subunit (SSU) proteome 0.16 Orthogroups_2024-Update
Sobic.003G322532.1 No alias component *(eS25) of small ribosomal-subunit (SSU) proteome 0.09 Orthogroups_2024-Update
Sobic.003G338966.1 No alias component *(eS25) of small ribosomal-subunit (SSU) proteome 0.32 Orthogroups_2024-Update
Solyc02g069850 No alias ribosomal protein S25 0.39 Orthogroups_2024-Update
Solyc10g052660 No alias ribosomal protein S25 0.08 Orthogroups_2024-Update
Sopen10g023380 No alias S25 ribosomal protein 0.2 Orthogroups_2024-Update
evm.model.contig_2033.4 No alias (at4g34555 : 106.0) Ribosomal protein S25 family... 0.3 Orthogroups_2024-Update
evm.model.tig00000037.5 No alias (at4g39200 : 85.1) Ribosomal protein S25 family protein;... 0.08 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR004977 Ribosomal_S25 7 105
No external refs found!