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  5. Sopen02g023620

Sopen02g023620


Description : WD domain, G-beta repeat


Gene families : OG_42_0001613 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001613_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen02g023620
Cluster HCCA clusters: Cluster_2

Target Alias Description ECC score Gene Family Method Actions
442850 No alias Transducin/WD40 repeat-like superfamily protein 0.04 Orthogroups_2024-Update
A4A49_26826 No alias katanin p80 wd40 repeat-containing subunit b1-like protein 0.07 Orthogroups_2024-Update
Brara.A02528.1 No alias regulatory component *(KTN80) of Katanin ATP-dependent... 0.04 Orthogroups_2024-Update
GRMZM5G817625 No alias Transducin/WD40 repeat-like superfamily protein 0.03 Orthogroups_2024-Update
GRMZM5G842970 No alias Transducin/WD40 repeat-like superfamily protein 0.03 Orthogroups_2024-Update
Glyma.13G244300 No alias Transducin/WD40 repeat-like superfamily protein 0.03 Orthogroups_2024-Update
HORVU3Hr1G076760.13 No alias Unknown function 0.02 Orthogroups_2024-Update
Potri.010G255400 No alias Transducin/WD40 repeat-like superfamily protein 0.04 Orthogroups_2024-Update
Potri.011G045500 No alias Transducin/WD40 repeat-like superfamily protein 0.07 Orthogroups_2024-Update
Seita.5G340100.1 No alias regulatory component *(KTN80) of Katanin ATP-dependent... 0.02 Orthogroups_2024-Update
Sobic.003G316700.1 No alias regulatory component *(KTN80) of Katanin ATP-dependent... 0.02 Orthogroups_2024-Update
Solyc02g078800 No alias Katanin p80 WD40 repeat-containing subunit B1 homolog... 0.11 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001680 WD40_repeat 174 212
IPR001680 WD40_repeat 51 86
IPR001680 WD40_repeat 7 44
IPR001680 WD40_repeat 92 128
IPR001680 WD40_repeat 134 170
IPR028021 Katanin_C-terminal 868 1026
No external refs found!