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  5. Sopen03g024430

Sopen03g024430


Description : AP2 domain


Gene families : OG_42_0000000 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen03g024430
Cluster HCCA clusters: Cluster_118

Target Alias Description ECC score Gene Family Method Actions
A4A49_36962 No alias ethylene-responsive transcription factor erf003 0.02 Orthogroups_2024-Update
At1g50640 No alias Uncharacterized protein At1g50640 (Fragment)... 0.02 Orthogroups_2024-Update
Brara.C03562.1 No alias subgroup ERF-VIII transcription factor 0.02 Orthogroups_2024-Update
Brara.E02172.1 No alias subgroup ERF-VIII transcription factor 0.03 Orthogroups_2024-Update
Brara.G02517.1 No alias transcription factor *(CRF) & subgroup ERF-VI... 0.02 Orthogroups_2024-Update
Brara.G02798.1 No alias transcription factor *(CRF) & subgroup ERF-VI... 0.03 Orthogroups_2024-Update
Brara.I03346.1 No alias Unknown function 0.02 Orthogroups_2024-Update
GRMZM2G149756 No alias Integrase-type DNA-binding superfamily protein 0.02 Orthogroups_2024-Update
GRMZM2G156006 No alias Integrase-type DNA-binding superfamily protein 0.02 Orthogroups_2024-Update
GRMZM2G175543 No alias ethylene responsive element binding factor 4 0.03 Orthogroups_2024-Update
Glyma.02G066200 No alias Integrase-type DNA-binding superfamily protein 0.02 Orthogroups_2024-Update
Glyma.05G063500 No alias ethylene responsive element binding factor 5 0.02 Orthogroups_2024-Update
Glyma.06G301300 No alias Integrase-type DNA-binding superfamily protein 0.02 Orthogroups_2024-Update
Glyma.11G036400 No alias ethylene responsive element binding factor 5 0.02 Orthogroups_2024-Update
Glyma.14G084700 No alias related to AP2 1 0.03 Orthogroups_2024-Update
HORVU4Hr1G079630.1 No alias subgroup ERF-IX transcription factor 0.02 Orthogroups_2024-Update
HORVU7Hr1G037180.1 No alias subgroup ERF-I transcription factor 0.02 Orthogroups_2024-Update
MA_5805979g0010 No alias (at4g17500 : 88.2) Encodes a member of the ERF (ethylene... 0.03 Orthogroups_2024-Update
MA_78784g0010 No alias no hits & (original description: no original description) 0.03 Orthogroups_2024-Update
MA_9304g0020 No alias (at1g28360 : 87.4) encodes a member of the ERF (ethylene... 0.02 Orthogroups_2024-Update
PSME_00022946-RA No alias (at5g61890 : 105.0) encodes a member of the ERF... 0.02 Orthogroups_2024-Update
PSME_00035758-RA No alias (q5kqn0|cax2_orysa : 165.0) Vacuolar cation/proton... 0.01 Orthogroups_2024-Update
PSME_00051454-RA No alias (at1g19210 : 98.6) encodes a member of the DREB... 0.02 Orthogroups_2024-Update
Potri.012G108500 No alias Integrase-type DNA-binding superfamily protein 0.02 Orthogroups_2024-Update
Potri.017G087800 No alias related to AP2 11 0.03 Orthogroups_2024-Update
Seita.2G138400.1 No alias subgroup ERF-IX transcription factor 0.02 Orthogroups_2024-Update
Seita.3G021800.1 No alias subgroup ERF-V transcription factor 0.02 Orthogroups_2024-Update
Sobic.003G381400.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Sobic.006G184700.1 No alias subgroup ERF-III transcription factor 0.01 Orthogroups_2024-Update
Sobic.007G188701.1 No alias subgroup ERF-X transcription factor 0.03 Orthogroups_2024-Update
Solyc03g120840 No alias ethylene-responsive transcription factor (AHRD V3.3 *-*... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA InterProScan predictions
BP GO:0006355 regulation of transcription, DNA-templated IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001471 AP2/ERF_dom 106 156
No external refs found!