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  5. Sopen03g034320

Sopen03g034320


Description : Rare lipoprotein A (RlpA)-like double-psi beta-barrel


Gene families : OG_42_0000014 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000014_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen03g034320
Cluster HCCA clusters: Cluster_13

Target Alias Description ECC score Gene Family Method Actions
Glyma.20G033900 No alias expansin A15 0.04 Orthogroups_2024-Update
Kfl00036_0270 kfl00036_0270_v1.1 (q6zgu9|expa5_orysa : 123.0) Expansin-A5 precursor... 0.02 Orthogroups_2024-Update
Kfl00557_0080 kfl00557_0080_v1.1 no hits & (original description: no original description) 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR009009 RlpA-like_DPBB 46 131
IPR009009 RlpA-like_DPBB 275 359
IPR009009 RlpA-like_DPBB 505 589
IPR007117 Expansin_CBD 601 677
IPR007117 Expansin_CBD 371 447
IPR007117 Expansin_CBD 143 219
No external refs found!