Sopen03g037750

Description : RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)

Gene families : OG_42_0006215 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0006215_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Solanum release: Sopen03g037750
Cluster	HCCA clusters: Cluster_118

Target	Alias	Description	ECC score	Gene Family Method
Kfl00057_0050	kfl00057_0050_v1.1	(at2g18510 : 375.0) embryo defective 2444 (emb2444);...	0.01	Orthogroups_2024-Update
Pp1s70_254V6	No alias	spliceosome associated	0.02	Orthogroups_2024-Update
evm.model.tig00001029.19	No alias	(at2g18510 : 282.0) embryo defective 2444 (emb2444);...	0.02	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	IEA	InterProScan predictions
MF	GO:0005488	binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR000504	RRM_dom	28	97
IPR000504	RRM_dom	114	184

External Links

No external refs found!