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  5. Sopen03g037930

Sopen03g037930


Description : WD domain, G-beta repeat


Gene families : OG_42_0002129 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002129_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen03g037930
Cluster HCCA clusters: Cluster_58

Target Alias Description ECC score Gene Family Method Actions
266532 No alias receptor for activated C kinase 1B 0.18 Orthogroups_2024-Update
A4A49_37187 No alias guanine nucleotide-binding protein subunit beta-like protein 0.09 Orthogroups_2024-Update
At1g18080 No alias RACK1A_AT [Source:UniProtKB/TrEMBL;Acc:A0A178WHX3] 0.05 Orthogroups_2024-Update
At1g48630 No alias RACK1B_AT [Source:UniProtKB/TrEMBL;Acc:A0A178W908] 0.05 Orthogroups_2024-Update
At3g18130 No alias Receptor for activated C kinase 1C... 0.07 Orthogroups_2024-Update
Bradi2g17350 No alias Transducin/WD40 repeat-like superfamily protein 0.08 Orthogroups_2024-Update
Bradi2g46840 No alias Transducin/WD40 repeat-like superfamily protein 0.11 Orthogroups_2024-Update
Brara.A02955.1 No alias component *(RACK1) of small ribosomal-subunit (SSU) proteome 0.31 Orthogroups_2024-Update
Brara.E02380.1 No alias component *(RACK1) of small ribosomal-subunit (SSU) proteome 0.16 Orthogroups_2024-Update
Brara.F01274.1 No alias component *(RACK1) of small ribosomal-subunit (SSU) proteome 0.1 Orthogroups_2024-Update
Brara.H02438.1 No alias component *(RACK1) of small ribosomal-subunit (SSU) proteome 0.27 Orthogroups_2024-Update
Brara.I04799.1 No alias component *(RACK1) of small ribosomal-subunit (SSU) proteome 0.12 Orthogroups_2024-Update
Cre06.g278222 No alias receptor for activated C kinase 1C 0.04 Orthogroups_2024-Update
GRMZM2G040477 No alias Transducin/WD40 repeat-like superfamily protein 0.05 Orthogroups_2024-Update
Glyma.05G243800 No alias receptor for activated C kinase 1C 0.14 Orthogroups_2024-Update
Glyma.08G051600 No alias receptor for activated C kinase 1C 0.15 Orthogroups_2024-Update
HORVU1Hr1G083710.2 No alias component *(RACK1) of small ribosomal-subunit (SSU) proteome 0.08 Orthogroups_2024-Update
HORVU3Hr1G063670.2 No alias component *(RACK1) of small ribosomal-subunit (SSU) proteome 0.12 Orthogroups_2024-Update
Kfl00025_0440 kfl00025_0440_v1.... (p25387|gblp_chlre : 555.0) Guanine nucleotide-binding... 0.03 Orthogroups_2024-Update
LOC_Os01g49290 No alias WD repeat-containing protein, putative, expressed 0.04 Orthogroups_2024-Update
Mp3g15630.1 No alias associated component RACK1 of SSU proteome 0.09 Orthogroups_2024-Update
PSME_00054687-RA No alias (o24076|gblp_medsa : 541.0) Guanine nucleotide-binding... 0.03 Orthogroups_2024-Update
Potri.012G052700 No alias Transducin/WD40 repeat-like superfamily protein 0.07 Orthogroups_2024-Update
Potri.015G041600 No alias Transducin/WD40 repeat-like superfamily protein 0.09 Orthogroups_2024-Update
Pp1s15_197V6 No alias receptor of activated protein kinase c component of 40s... 0.07 Orthogroups_2024-Update
Pp1s259_87V6 No alias receptor of activated protein kinase c component of 40s... 0.02 Orthogroups_2024-Update
Seita.3G155500.1 No alias component *(RACK1) of small ribosomal-subunit (SSU) proteome 0.08 Orthogroups_2024-Update
Seita.5G275300.1 No alias component *(RACK1) of small ribosomal-subunit (SSU) proteome 0.12 Orthogroups_2024-Update
Sobic.003G261100.1 No alias component *(RACK1) of small ribosomal-subunit (SSU) proteome 0.08 Orthogroups_2024-Update
Sobic.009G223300.1 No alias component *(RACK1) of small ribosomal-subunit (SSU) proteome 0.31 Orthogroups_2024-Update
Solyc03g119040 No alias LeArcA2 protein containing 7 WD40 repeats 0.28 Orthogroups_2024-Update
Solyc06g069010 No alias LeArcA1 protein 0.09 Orthogroups_2024-Update
Solyc12g040510 No alias Transducin/WD40 repeat-like superfamily protein (AHRD... 0.04 Orthogroups_2024-Update
evm.model.contig_2334.1 No alias (p25387|gblp_chlre : 464.0) Guanine nucleotide-binding... 0.29 Orthogroups_2024-Update
evm.model.tig00000169.6 No alias (p25387|gblp_chlre : 478.0) Guanine nucleotide-binding... 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001680 WD40_repeat 56 92
IPR001680 WD40_repeat 10 45
IPR001680 WD40_repeat 298 321
IPR001680 WD40_repeat 100 134
IPR001680 WD40_repeat 187 222
IPR001680 WD40_repeat 228 262
IPR001680 WD40_repeat 147 180
No external refs found!