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  5. Sopen03g039320

Sopen03g039320


Description : Cyclin, N-terminal domain


Gene families : OG_42_0000120 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000120_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen03g039320
Cluster HCCA clusters: Cluster_349

Target Alias Description ECC score Gene Family Method Actions
230742 No alias CYCLIN B2;4 0.03 Orthogroups_2024-Update
97411 No alias Cyclin A1;1 0.03 Orthogroups_2024-Update
At1g20590 No alias Cyclin-B2-5 [Source:UniProtKB/Swiss-Prot;Acc:Q9LM91] 0.03 Orthogroups_2024-Update
At1g34460 No alias CYCLIN B1;5 [Source:TAIR;Acc:AT1G34460] 0.03 Orthogroups_2024-Update
Bradi2g52760 No alias Cyclin family protein 0.03 Orthogroups_2024-Update
Brara.B00199.1 No alias regulatory protein *(CYCB) of cell cycle 0.03 Orthogroups_2024-Update
Brara.C00237.1 No alias regulatory protein *(CYCB) of cell cycle 0.03 Orthogroups_2024-Update
Brara.E01867.1 No alias regulatory protein *(TAM) involved in metaphase to... 0.03 Orthogroups_2024-Update
Brara.G00692.1 No alias regulatory protein *(CYCB) of cell cycle 0.05 Orthogroups_2024-Update
Brara.I04921.1 No alias regulatory protein *(CYCA) of cell cycle 0.02 Orthogroups_2024-Update
Brara.K00759.1 No alias regulatory protein *(CYCB) of cell cycle 0.04 Orthogroups_2024-Update
Glyma.02G277600 No alias Cyclin family protein 0.04 Orthogroups_2024-Update
Glyma.04G001100 No alias Cyclin B2;3 0.03 Orthogroups_2024-Update
Glyma.04G043400 No alias Cyclin A3;1 0.03 Orthogroups_2024-Update
Glyma.04G043500 No alias Cyclin A3;1 0.03 Orthogroups_2024-Update
Glyma.04G071600 No alias mitotic-like cyclin 3B from Arabidopsis 0.03 Orthogroups_2024-Update
Glyma.06G116100 No alias Cyclin A1;1 0.03 Orthogroups_2024-Update
Glyma.07G034100 No alias Cyclin A2;4 0.05 Orthogroups_2024-Update
Glyma.08G234900 No alias cyclin b3;1 0.03 Orthogroups_2024-Update
Glyma.11G084500 No alias Cyclin B2;3 0.04 Orthogroups_2024-Update
Glyma.14G037100 No alias Cyclin family protein 0.03 Orthogroups_2024-Update
Glyma.14G154200 No alias Cyclin A1;1 0.03 Orthogroups_2024-Update
Glyma.19G127200 No alias Cyclin family protein 0.04 Orthogroups_2024-Update
HORVU5Hr1G006970.2 No alias Unknown function 0.02 Orthogroups_2024-Update
Kfl00560_0010 kfl00560_0010_v1.1 (at1g76310 : 298.0) core cell cycle genes; CYCLIN B2;4... 0.02 Orthogroups_2024-Update
MA_28323g0010 No alias (at5g11300 : 355.0) mitotic-like cyclin, core cell cycle... 0.02 Orthogroups_2024-Update
Mp5g10030.1 No alias cyclin (CYCB) 0.02 Orthogroups_2024-Update
PSME_00015735-RA No alias (p34800|ccn1_antma : 353.0) G2/mitotic-specific cyclin-1... 0.02 Orthogroups_2024-Update
Sobic.001G169800.2 No alias regulatory protein *(CYCA) of cell cycle 0.02 Orthogroups_2024-Update
Solyc01g009040 No alias cyclinB1_4 0.02 Orthogroups_2024-Update
Solyc03g032190 No alias cyclinB2_7 0.03 Orthogroups_2024-Update
Solyc03g120440 No alias cyclin A2_1 0.03 Orthogroups_2024-Update
Solyc04g078310 No alias cyclin A3_1 0.04 Orthogroups_2024-Update
Solyc04g082430 No alias cyclinB2_4 0.02 Orthogroups_2024-Update
Solyc06g065680 No alias cyclin A2 0.03 Orthogroups_2024-Update
Solyc07g066660 No alias cyclinB3_1 0.06 Orthogroups_2024-Update
Solyc10g078330 No alias B-type cyclin 0.03 Orthogroups_2024-Update
Solyc10g080950 No alias cyclinB1_2 0.03 Orthogroups_2024-Update
Solyc11g005090 No alias cyclin A1 0.06 Orthogroups_2024-Update
Solyc12g088470 No alias cyclin A3_4 0.04 Orthogroups_2024-Update
Solyc12g088530 No alias cyclin A3.1 0.03 Orthogroups_2024-Update
Sopen06g024200 No alias Cyclin, N-terminal domain 0.04 Orthogroups_2024-Update
evm.model.contig_554.3 No alias (q40671|ccnb2_orysa : 240.0) G2/mitotic-specific... 0.01 Orthogroups_2024-Update
evm.model.tig00000076.67 No alias (at1g44110 : 156.0) Cyclin A1;1 (CYCA1;1); CONTAINS... 0.01 Orthogroups_2024-Update
evm.model.tig00000769.38 No alias (at1g76310 : 252.0) core cell cycle genes; CYCLIN B2;4... 0.01 Orthogroups_2024-Update

Type GO Term Name Evidence Source
CC GO:0005634 nucleus IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR004367 Cyclin_C-dom 332 454
IPR006671 Cyclin_N 203 330
No external refs found!