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  5. Sopen04g004200

Sopen04g004200


Description : Tetratricopeptide repeat


Gene families : OG_42_0005803 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0005803_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen04g004200
Cluster HCCA clusters: Cluster_2

Target Alias Description ECC score Gene Family Method Actions
A4A49_20351 No alias protein high chlorophyll fluorescent 107 0.05 Orthogroups_2024-Update
Bradi1g64381 No alias high chlorophyll fluorescent 107 0.03 Orthogroups_2024-Update
Brara.E02474.1 No alias plastidial transcript stability factor *(HCF107) 0.03 Orthogroups_2024-Update
Glyma.07G240000 No alias high chlorophyll fluorescent 107 0.03 Orthogroups_2024-Update
Glyma.17G033400 No alias high chlorophyll fluorescent 107 0.03 Orthogroups_2024-Update
HORVU4Hr1G053530.2 No alias plastidial transcript stability factor *(HCF107) 0.04 Orthogroups_2024-Update
Kfl00145_0180 kfl00145_0180_v1.1 (at3g17040 : 324.0) It is a RNA tetratricopeptide... 0.02 Orthogroups_2024-Update
LOC_Os03g19560 No alias tetratricopeptide repeat domain containing protein, expressed 0.05 Orthogroups_2024-Update
Mp5g00100.1 No alias plastidial RNA transcript stability factor 0.02 Orthogroups_2024-Update
Potri.010G145000 No alias high chlorophyll fluorescent 107 0.03 Orthogroups_2024-Update
Sobic.001G394800.1 No alias plastidial transcript stability factor *(HCF107) 0.03 Orthogroups_2024-Update
Solyc04g009020 No alias PsbB mRNA maturation factor Mbb1 (AHRD V3.3 *** W9RTZ1_9ROSA) 0.11 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

No InterPro domains available for this sequence

No external refs found!