Sopen04g004300

Description : Ring finger domain

Gene families : OG_42_0000043 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000043_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Solanum release: Sopen04g004300
Cluster	HCCA clusters: Cluster_373

Target	Alias	Description	ECC score	Gene Family Method
A4A49_41691	No alias	e3 ubiquitin-protein ligase sdir1	0.02	Orthogroups_2024-Update
LOC_Os03g22830	No alias	zinc finger, C3HC4 type domain containing protein, expressed	0.02	Orthogroups_2024-Update
PSME_00056956-RA	No alias	(at2g40830 : 186.0) Encodes a putative RING-H2 finger...	0.02	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004842	ubiquitin-protein transferase activity	None	Extended
MF	GO:0016740	transferase activity	None	Extended
MF	GO:0019787	ubiquitin-like protein transferase activity	None	Extended
MF	GO:0061630	ubiquitin protein ligase activity	IEA	InterProScan predictions
MF	GO:0061659	ubiquitin-like protein ligase activity	None	Extended
MF	GO:0140096	catalytic activity, acting on a protein	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR039525	RNF126-like_zinc-ribbon	15	48
IPR001841	Znf_RING	211	253

External Links

No external refs found!