Description : GATA transcription factor, putative (AHRD V3.3 *** B9S6H2_RICCO)
Gene families : OG_42_0000071 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000071_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | Solanum release: Solyc02g062760 | |
Cluster | HCCA clusters: Cluster_249 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
Brara.C03623.1 | No alias | transcription factor *(A/B-GATA) | 0.02 | Orthogroups_2024-Update | |
Glyma.09G062800 | No alias | GATA type zinc finger transcription factor family protein | 0.04 | Orthogroups_2024-Update | |
Kfl00243_0100 | kfl00243_0100_v1.1 | no hits & (original description: no original description) | 0.02 | Orthogroups_2024-Update | |
LOC_Os02g43150 | No alias | GATA zinc finger domain containing protein, expressed | 0.03 | Orthogroups_2024-Update | |
Sopen01g052460 | No alias | GATA zinc finger | 0.03 | Orthogroups_2024-Update | |
Sopen02g013790 | No alias | GATA zinc finger | 0.04 | Orthogroups_2024-Update |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003700 | DNA-binding transcription factor activity | IEA | InterProScan predictions |
BP | GO:0006355 | regulation of transcription, DNA-templated | IEA | InterProScan predictions |
MF | GO:0008270 | zinc ion binding | IEA | InterProScan predictions |
MF | GO:0043565 | sequence-specific DNA binding | IEA | InterProScan predictions |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0004867 | serine-type endopeptidase inhibitor activity | IEP | Predicted GO |
MF | GO:0042393 | histone binding | IEP | Predicted GO |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR000679 | Znf_GATA | 146 | 180 |
No external refs found! |