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  5. Sopen04g022550

Sopen04g022550


Description : Integrase core domain


Gene families : OG_42_0000004 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen04g022550
Cluster HCCA clusters: Cluster_13

Target Alias Description ECC score Gene Family Method Actions
LOC_Os08g10244 No alias retrotransposon protein, putative, unclassified, expressed 0.03 Orthogroups_2024-Update
Solyc01g016710 No alias No description available 0.03 Orthogroups_2024-Update
Solyc10g052420 No alias No description available 0.02 Orthogroups_2024-Update
Solyc11g063750 No alias No description available 0.03 Orthogroups_2024-Update
Sopen11g025280 No alias Integrase core domain 0.04 Orthogroups_2024-Update
Sopen12g021520 No alias Integrase core domain 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source
BP GO:0015074 DNA integration IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001584 Integrase_cat-core 984 1094
No external refs found!