Description : Integrase core domain
Gene families : OG_42_0000004 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | Solanum release: Sopen04g022550 | |
Cluster | HCCA clusters: Cluster_13 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
LOC_Os08g10244 | No alias | retrotransposon protein, putative, unclassified, expressed | 0.03 | Orthogroups_2024-Update | |
Solyc01g016710 | No alias | No description available | 0.03 | Orthogroups_2024-Update | |
Solyc10g052420 | No alias | No description available | 0.02 | Orthogroups_2024-Update | |
Solyc11g063750 | No alias | No description available | 0.03 | Orthogroups_2024-Update | |
Sopen11g025280 | No alias | Integrase core domain | 0.04 | Orthogroups_2024-Update | |
Sopen12g021520 | No alias | Integrase core domain | 0.04 | Orthogroups_2024-Update |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0015074 | DNA integration | IEA | InterProScan predictions |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No Predicted GO terms available for this sequence |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR001584 | Integrase_cat-core | 984 | 1094 |
No external refs found! |