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  5. Solyc02g063090

Solyc02g063090


Description : T-complex protein 1 subunit zeta 1 (AHRD V3.3 *** TCPZA_ARATH)


Gene families : OG_42_0004744 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0004744_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc02g063090
Cluster HCCA clusters: Cluster_96

Target Alias Description ECC score Gene Family Method Actions
At3g02530 No alias T-complex protein 1 subunit zeta 1... 0.03 Orthogroups_2024-Update
Bradi3g04130 No alias TCP-1/cpn60 chaperonin family protein 0.06 Orthogroups_2024-Update
Cre09.g397200 No alias TCP-1/cpn60 chaperonin family protein 0.02 Orthogroups_2024-Update
Glyma.08G364000 No alias TCP-1/cpn60 chaperonin family protein 0.04 Orthogroups_2024-Update
Glyma.18G298100 No alias TCP-1/cpn60 chaperonin family protein 0.04 Orthogroups_2024-Update
HORVU6Hr1G091690.4 No alias subunit zeta *(CCT6) of CCT chaperonin folding complex 0.06 Orthogroups_2024-Update
Kfl00177_0050 kfl00177_0050_v1.1 (at3g02530 : 867.0) TCP-1/cpn60 chaperonin family... 0.03 Orthogroups_2024-Update
Mp8g07530.1 No alias CCT6 subunit zeta of CCT chaperonin folding complex 0.02 Orthogroups_2024-Update
Potri.017G113600 No alias TCP-1/cpn60 chaperonin family protein 0.03 Orthogroups_2024-Update
Potri.T147600 No alias TCP-1/cpn60 chaperonin family protein 0.03 Orthogroups_2024-Update
Pp1s138_31V6 No alias F16B3.16; chaperonin, putative [Arabidopsis thaliana] 0.03 Orthogroups_2024-Update
Seita.3G039600.1 No alias subunit zeta *(CCT6) of CCT chaperonin folding complex 0.08 Orthogroups_2024-Update
Sobic.002G423500.1 No alias subunit zeta *(CCT6) of CCT chaperonin folding complex 0.07 Orthogroups_2024-Update
Sopen02g014170 No alias TCP-1/cpn60 chaperonin family 0.08 Orthogroups_2024-Update
evm.model.contig_827.1 No alias (at5g16070 : 650.0) TCP-1/cpn60 chaperonin family... 0.03 Orthogroups_2024-Update
evm.model.tig00000789.37 No alias (at3g02530 : 621.0) TCP-1/cpn60 chaperonin family... 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0000175 3'-5'-exoribonuclease activity IEP Predicted GO
CC GO:0000178 exosome (RNase complex) IEP Predicted GO
MF GO:0003676 nucleic acid binding IEP Predicted GO
MF GO:0003678 DNA helicase activity IEP Predicted GO
MF GO:0003684 damaged DNA binding IEP Predicted GO
MF GO:0003689 DNA clamp loader activity IEP Predicted GO
MF GO:0003697 single-stranded DNA binding IEP Predicted GO
MF GO:0003723 RNA binding IEP Predicted GO
MF GO:0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity IEP Predicted GO
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP Predicted GO
MF GO:0003906 DNA-(apurinic or apyrimidinic site) endonuclease activity IEP Predicted GO
MF GO:0004066 asparagine synthase (glutamine-hydrolyzing) activity IEP Predicted GO
MF GO:0004386 helicase activity IEP Predicted GO
MF GO:0004518 nuclease activity IEP Predicted GO
MF GO:0004526 ribonuclease P activity IEP Predicted GO
MF GO:0004532 exoribonuclease activity IEP Predicted GO
MF GO:0004540 ribonuclease activity IEP Predicted GO
MF GO:0004549 tRNA-specific ribonuclease activity IEP Predicted GO
CC GO:0005634 nucleus IEP Predicted GO
CC GO:0005663 DNA replication factor C complex IEP Predicted GO
CC GO:0005759 mitochondrial matrix IEP Predicted GO
BP GO:0006139 nucleobase-containing compound metabolic process IEP Predicted GO
BP GO:0006289 nucleotide-excision repair IEP Predicted GO
BP GO:0006396 RNA processing IEP Predicted GO
BP GO:0006457 protein folding IEP Predicted GO
BP GO:0006528 asparagine metabolic process IEP Predicted GO
BP GO:0006529 asparagine biosynthetic process IEP Predicted GO
BP GO:0006725 cellular aromatic compound metabolic process IEP Predicted GO
BP GO:0006807 nitrogen compound metabolic process IEP Predicted GO
BP GO:0006886 intracellular protein transport IEP Predicted GO
MF GO:0008094 DNA-dependent ATPase activity IEP Predicted GO
MF GO:0008097 5S rRNA binding IEP Predicted GO
MF GO:0008536 Ran GTPase binding IEP Predicted GO
BP GO:0009058 biosynthetic process IEP Predicted GO
BP GO:0009059 macromolecule biosynthetic process IEP Predicted GO
BP GO:0009066 aspartate family amino acid metabolic process IEP Predicted GO
BP GO:0009067 aspartate family amino acid biosynthetic process IEP Predicted GO
MF GO:0009982 pseudouridine synthase activity IEP Predicted GO
BP GO:0016070 RNA metabolic process IEP Predicted GO
MF GO:0016229 steroid dehydrogenase activity IEP Predicted GO
MF GO:0016796 exonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters IEP Predicted GO
MF GO:0016799 hydrolase activity, hydrolyzing N-glycosyl compounds IEP Predicted GO
MF GO:0016884 carbon-nitrogen ligase activity, with glutamine as amido-N-donor IEP Predicted GO
MF GO:0016896 exoribonuclease activity, producing 5'-phosphomonoesters IEP Predicted GO
MF GO:0017016 Ras GTPase binding IEP Predicted GO
MF GO:0019899 enzyme binding IEP Predicted GO
CC GO:0030684 preribosome IEP Predicted GO
MF GO:0031267 small GTPase binding IEP Predicted GO
CC GO:0031974 membrane-enclosed lumen IEP Predicted GO
CC GO:0032040 small-subunit processome IEP Predicted GO
MF GO:0033170 protein-DNA loading ATPase activity IEP Predicted GO
MF GO:0033764 steroid dehydrogenase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP Predicted GO
MF GO:0034062 5'-3' RNA polymerase activity IEP Predicted GO
BP GO:0034641 cellular nitrogen compound metabolic process IEP Predicted GO
BP GO:0034645 cellular macromolecule biosynthetic process IEP Predicted GO
BP GO:0043170 macromolecule metabolic process IEP Predicted GO
CC GO:0043226 organelle IEP Predicted GO
CC GO:0043229 intracellular organelle IEP Predicted GO
CC GO:0043233 organelle lumen IEP Predicted GO
BP GO:0043603 cellular amide metabolic process IEP Predicted GO
BP GO:0043604 amide biosynthetic process IEP Predicted GO
BP GO:0044238 primary metabolic process IEP Predicted GO
BP GO:0044249 cellular biosynthetic process IEP Predicted GO
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP Predicted GO
CC GO:0044424 intracellular part IEP Predicted GO
CC GO:0044464 cell part IEP Predicted GO
BP GO:0046483 heterocycle metabolic process IEP Predicted GO
MF GO:0051020 GTPase binding IEP Predicted GO
CC GO:0070013 intracellular organelle lumen IEP Predicted GO
BP GO:0090304 nucleic acid metabolic process IEP Predicted GO
MF GO:0097747 RNA polymerase activity IEP Predicted GO
MF GO:0140097 catalytic activity, acting on DNA IEP Predicted GO
MF GO:0140098 catalytic activity, acting on RNA IEP Predicted GO
BP GO:1901360 organic cyclic compound metabolic process IEP Predicted GO
BP GO:1901576 organic substance biosynthetic process IEP Predicted GO
CC GO:1905354 exoribonuclease complex IEP Predicted GO
CC GO:1990904 ribonucleoprotein complex IEP Predicted GO
InterPro domains Description Start Stop
IPR002423 Cpn60/TCP-1 29 528
No external refs found!