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  5. Sopen04g029990

Sopen04g029990


Description : MYND finger


Gene families : OG_42_0000241 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000241_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen04g029990
Cluster HCCA clusters: Cluster_3

Target Alias Description ECC score Gene Family Method Actions
Brara.F01198.1 No alias deubiquitinase *(UBP15-21) 0.02 Orthogroups_2024-Update
GRMZM2G386851 No alias ubiquitin-specific protease 25 0.03 Orthogroups_2024-Update
Glyma.02G040900 No alias ubiquitin-specific protease 17 0.02 Orthogroups_2024-Update
Glyma.08G175500 No alias ubiquitin-specific protease 25 0.03 Orthogroups_2024-Update
LOC_Os05g43480 No alias ubiquitin carboxyl-terminal hydrolase domain containing... 0.02 Orthogroups_2024-Update
LOC_Os09g28940 No alias ubiquitin carboxyl-terminal hydrolase domain containing... 0.02 Orthogroups_2024-Update
Potri.006G270600 No alias ubiquitin-specific protease 19 0.04 Orthogroups_2024-Update
Solyc08g005080 No alias LOW QUALITY:Ubiquitin carboxyl-terminal hydrolase-like... 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
BP GO:0016579 protein deubiquitination IEA InterProScan predictions
MF GO:0036459 thiol-dependent ubiquitinyl hydrolase activity IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002893 Znf_MYND 114 151
IPR001394 Peptidase_C19_UCH 605 646
No external refs found!