Sopen04g033650

Description : APO RNA-binding

Gene families : OG_42_0001137 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001137_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Solanum release: Sopen04g033650
Cluster	HCCA clusters: Cluster_199

Target	Alias	Description	ECC score	Gene Family Method
At3g21740	No alias	APO protein 4, mitochondrial...	0.03	Orthogroups_2024-Update
Glyma.09G086100	No alias	Arabidopsis thaliana protein of unknown function (DUF794)	0.02	Orthogroups_2024-Update
Kfl00257_0020	kfl00257_0020_v1.1	(at3g21740 : 89.7) ACCUMULATION OF PHOTOSYSTEM ONE 4;...	0.02	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003723	RNA binding	IEA	InterProScan predictions
MF	GO:0005488	binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR023342	APO_dom	49	185
IPR023342	APO_dom	212	326

External Links

No external refs found!