Sopen05g002490

Description : Paired amphipathic helix repeat

Gene families : OG_42_0000363 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000363_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Solanum release: Sopen05g002490
Cluster	HCCA clusters: Cluster_2

Target	Alias	Description	ECC score	Gene Family Method
At1g27220	No alias	Paired amphipathic helix repeat-containing protein...	0.02	Orthogroups_2024-Update
At1g59890	No alias	SIN3-like 5 [Source:UniProtKB/TrEMBL;Acc:F4IEM8]	0.03	Orthogroups_2024-Update
Bradi2g00860	No alias	SIN3-like 4	0.03	Orthogroups_2024-Update
Brara.A03931.1	No alias	component *(SNL) of histone deacetylase machineries	0.02	Orthogroups_2024-Update
Brara.G02451.1	No alias	component *(SNL) of histone deacetylase machineries	0.02	Orthogroups_2024-Update
HORVU1Hr1G000290.3	No alias	component *(SNL) of histone deacetylase machineries	0.05	Orthogroups_2024-Update
Kfl00311_0140	kfl00311_0140_v1.1	(at5g15020 : 616.0) Encodes a homolog of the...	0.02	Orthogroups_2024-Update
PSME_00032314-RA	No alias	(at1g70060 : 409.0) Encodes a homolog of the...	0.03	Orthogroups_2024-Update
PSME_00034204-RA	No alias	(at1g24190 : 236.0) Enhances AtERF7-mediated ...	0.02	Orthogroups_2024-Update
Seita.3G117100.1	No alias	component *(SNL) of histone deacetylase machineries	0.02	Orthogroups_2024-Update
Seita.5G073400.1	No alias	component *(SNL) of histone deacetylase machineries	0.03	Orthogroups_2024-Update
Sobic.003G101400.1	No alias	component *(SNL) of histone deacetylase machineries	0.04	Orthogroups_2024-Update
Solyc05g006540	No alias	Paired amphipathic helix SIN3-like protein (AHRD V3.3...	0.06	Orthogroups_2024-Update
evm.model.contig_3708.1	No alias	(original description: no original description)	0.03	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	InterProScan predictions
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR013194	HDAC_interact_dom	435	526
IPR003822	PAH	138	181
IPR003822	PAH	300	340
IPR003822	PAH	53	97
IPR031693	Sin3_C	1071	1317

External Links

No external refs found!