Sopen05g002560

Description : NB-ARC domain

Gene families : OG_42_0000010 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Solanum release: Sopen05g002560
Cluster	HCCA clusters: Cluster_110

Target	Alias	Description	ECC score	Gene Family Method
At4g16920	No alias	Disease resistance protein (TIR-NBS-LRR class) family...	0.03	Orthogroups_2024-Update
At5g36930	No alias	Disease resistance protein (TIR-NBS-LRR class) family...	0.04	Orthogroups_2024-Update
Brara.J01729.1	No alias	effector receptor *(NLR)	0.03	Orthogroups_2024-Update
Glyma.03G075300	No alias	Disease resistance protein (TIR-NBS-LRR class) family	0.04	Orthogroups_2024-Update
Glyma.06G265420	No alias	Disease resistance protein (TIR-NBS-LRR class)	0.03	Orthogroups_2024-Update
Glyma.16G085900	No alias	Disease resistance protein (TIR-NBS-LRR class) family	0.02	Orthogroups_2024-Update
Glyma.16G214100	No alias	Disease resistance protein (TIR-NBS-LRR class) family	0.02	Orthogroups_2024-Update
MA_456384g0010	No alias	(at1g17615 : 124.0) Disease resistance protein (TIR-NBS...	0.03	Orthogroups_2024-Update
Potri.007G142600	No alias	Disease resistance protein (TIR-NBS-LRR class) family	0.04	Orthogroups_2024-Update
Potri.011G011900	No alias	Disease resistance protein (TIR-NBS-LRR class) family	0.02	Orthogroups_2024-Update
Potri.011G012750	No alias	Disease resistance protein (TIR-NBS-LRR class) family	0.03	Orthogroups_2024-Update
Potri.011G015400	No alias	transmembrane receptors;ATP binding	0.03	Orthogroups_2024-Update
Potri.017G105500	No alias	Disease resistance protein (TIR-NBS-LRR class) family	0.03	Orthogroups_2024-Update
Potri.019G068200	No alias	disease resistance protein (TIR-NBS-LRR class), putative	0.03	Orthogroups_2024-Update
Potri.T002066	No alias	Disease resistance protein (TIR-NBS-LRR class) family	0.02	Orthogroups_2024-Update
Potri.T002600	No alias	Disease resistance protein (TIR-NBS-LRR class) family	0.02	Orthogroups_2024-Update
Pp1s162_170V6	No alias	tir-nbs-lrr resistance protein	0.03	Orthogroups_2024-Update
Solyc12g097020	No alias	TIR-NBS-LRR class disease resistance protein (AHRD V3.3...	0.04	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	IEA	InterProScan predictions
BP	GO:0007165	signal transduction	IEA	InterProScan predictions
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0043531	ADP binding	IEA	InterProScan predictions
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR000157	TIR_dom	20	180
IPR002182	NB-ARC	193	416

External Links

No external refs found!

Sopen05g002560

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation