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Description : Ribosomal protein S4/S9 N-terminal domain
Gene families : OG_42_0001595 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001595_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Solanum release: Sopen05g003210 | |
| Cluster | HCCA clusters: Cluster_84 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| 157263 | No alias | Ribosomal protein S4 | 0.1 | Orthogroups_2024-Update | |
| 74302 | No alias | Ribosomal protein S4 | 0.13 | Orthogroups_2024-Update | |
| A4A49_39942 | No alias | 40s ribosomal protein s9-2 | 0.15 | Orthogroups_2024-Update | |
| A4A49_60535 | No alias | 40s ribosomal protein s9-2 | 0.07 | Orthogroups_2024-Update | |
| At5g39850 | No alias | 40S ribosomal protein S9-2... | 0.02 | Orthogroups_2024-Update | |
| Bradi1g20580 | No alias | Ribosomal protein S4 | 0.22 | Orthogroups_2024-Update | |
| Bradi1g61090 | No alias | Ribosomal protein S4 | 0.12 | Orthogroups_2024-Update | |
| Bradi4g07120 | No alias | Ribosomal protein S4 | 0.17 | Orthogroups_2024-Update | |
| Bradi4g14160 | No alias | Ribosomal protein S4 | 0.17 | Orthogroups_2024-Update | |
| Brara.B00594.1 | No alias | component *(uS4) of small ribosomal-subunit (SSU) proteome | 0.25 | Orthogroups_2024-Update | |
| Brara.C00655.1 | No alias | component *(uS4) of small ribosomal-subunit (SSU) proteome | 0.31 | Orthogroups_2024-Update | |
| Brara.J01972.1 | No alias | component *(uS4) of small ribosomal-subunit (SSU) proteome | 0.32 | Orthogroups_2024-Update | |
| Cre08.g359750 | No alias | Ribosomal protein S4 | 0.22 | Orthogroups_2024-Update | |
| GRMZM2G108348 | No alias | Ribosomal protein S4 | 0.1 | Orthogroups_2024-Update | |
| Glyma.04G171400 | No alias | Ribosomal protein S4 | 0.22 | Orthogroups_2024-Update | |
| Glyma.05G028000 | No alias | Ribosomal protein S4 | 0.19 | Orthogroups_2024-Update | |
| Glyma.06G192500 | No alias | Ribosomal protein S4 | 0.18 | Orthogroups_2024-Update | |
| Glyma.17G098600 | No alias | Ribosomal protein S4 | 0.2 | Orthogroups_2024-Update | |
| HORVU2Hr1G028510.1 | No alias | component *(uS4) of small ribosomal-subunit (SSU) proteome | 0.13 | Orthogroups_2024-Update | |
| HORVU5Hr1G038920.1 | No alias | component *(uS4) of small ribosomal-subunit (SSU) proteome | 0.14 | Orthogroups_2024-Update | |
| Kfl00038_0240 | kfl00038_0240_v1.1 | (at5g39850 : 306.0) Ribosomal protein S4; FUNCTIONS IN:... | 0.1 | Orthogroups_2024-Update | |
| MA_10429805g0030 | No alias | (at5g39850 : 342.0) Ribosomal protein S4; FUNCTIONS IN:... | 0.06 | Orthogroups_2024-Update | |
| MA_10431745g0020 | No alias | (at5g39850 : 343.0) Ribosomal protein S4; FUNCTIONS IN:... | 0.03 | Orthogroups_2024-Update | |
| Mp3g00520.1 | No alias | component RPS9 of SSU proteome | 0.13 | Orthogroups_2024-Update | |
| Potri.007G056100 | No alias | Ribosomal protein S4 | 0.13 | Orthogroups_2024-Update | |
| Pp1s13_410V6 | No alias | 40s ribosomal protein s9 | 0.11 | Orthogroups_2024-Update | |
| Pp1s14_31V6 | No alias | 40s ribosomal protein s9 | 0.14 | Orthogroups_2024-Update | |
| Pp1s223_95V6 | No alias | 40s ribosomal protein s9 | 0.31 | Orthogroups_2024-Update | |
| Pp1s47_40V6 | No alias | 40s ribosomal protein s9 | 0.05 | Orthogroups_2024-Update | |
| Pp1s91_122V6 | No alias | 40s ribosomal protein s9 | 0.06 | Orthogroups_2024-Update | |
| Seita.2G400200.1 | No alias | component *(uS4) of small ribosomal-subunit (SSU) proteome | 0.16 | Orthogroups_2024-Update | |
| Seita.3G361100.1 | No alias | component *(uS4) of small ribosomal-subunit (SSU) proteome | 0.14 | Orthogroups_2024-Update | |
| Seita.9G384200.1 | No alias | component *(uS4) of small ribosomal-subunit (SSU) proteome | 0.13 | Orthogroups_2024-Update | |
| Sobic.002G384700.2 | No alias | component *(uS4) of small ribosomal-subunit (SSU) proteome | 0.25 | Orthogroups_2024-Update | |
| Sobic.002G385100.1 | No alias | component *(uS4) of small ribosomal-subunit (SSU) proteome | 0.15 | Orthogroups_2024-Update | |
| Sobic.008G100000.1 | No alias | component *(uS4) of small ribosomal-subunit (SSU) proteome | 0.2 | Orthogroups_2024-Update | |
| Solyc01g010540 | No alias | 40S ribosomal protein S9, putative (AHRD V3.3 *** Q60CZ2_SOLDE) | 0.27 | Orthogroups_2024-Update | |
| Solyc01g010580 | No alias | 40S ribosomal protein S9, putative (AHRD V3.3 *** Q60CZ2_SOLDE) | 0.17 | Orthogroups_2024-Update | |
| Solyc04g005680 | No alias | Ribosomal protein (AHRD V3.3 *** B3TM27_ELAGV) | 0.03 | Orthogroups_2024-Update | |
| Solyc05g007250 | No alias | 40S ribosomal protein S9, putative (AHRD V3.3 *** Q60CZ2_SOLDE) | 0.22 | Orthogroups_2024-Update | |
| Sopen01g006190 | No alias | Ribosomal protein S4/S9 N-terminal domain | 0.13 | Orthogroups_2024-Update | |
| evm.model.contig_2502.7 | No alias | (at5g15200 : 244.0) Ribosomal protein S4; FUNCTIONS IN:... | 0.3 | Orthogroups_2024-Update | |
| evm.model.tig00000826.24 | No alias | (at5g15200 : 271.0) Ribosomal protein S4; FUNCTIONS IN:... | 0.16 | Orthogroups_2024-Update |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003723 | RNA binding | IEA | InterProScan predictions |
| CC | GO:0005622 | intracellular | IEA | InterProScan predictions |
| MF | GO:0019843 | rRNA binding | IEA | InterProScan predictions |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No Predicted GO terms available for this sequence |
| No external refs found! |