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  5. Sopen05g004030

Sopen05g004030


Description : BING4CT (NUC141) domain


Gene families : OG_42_0004970 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0004970_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen05g004030
Cluster HCCA clusters: Cluster_199

Target Alias Description ECC score Gene Family Method Actions
At3g10530 No alias F18K10.11 protein [Source:UniProtKB/TrEMBL;Acc:Q9LPP3] 0.04 Orthogroups_2024-Update
Bradi1g04226 No alias Transducin/WD40 repeat-like superfamily protein 0.05 Orthogroups_2024-Update
Brara.A03475.1 No alias SSU processome assembly factor *(UTP7) 0.05 Orthogroups_2024-Update
Cre12.g502800 No alias Transducin/WD40 repeat-like superfamily protein 0.09 Orthogroups_2024-Update
GRMZM2G096051 No alias Transducin/WD40 repeat-like superfamily protein 0.05 Orthogroups_2024-Update
PSME_00054559-RA No alias (at3g10530 : 362.0) Transducin/WD40 repeat-like... 0.02 Orthogroups_2024-Update
Potri.010G232500 No alias Transducin/WD40 repeat-like superfamily protein 0.04 Orthogroups_2024-Update
Pp1s45_24V6 No alias hypothetical protein [Oryza sativa (japonica cultivar-group)] 0.03 Orthogroups_2024-Update
Seita.5G049800.1 No alias SSU processome assembly factor *(UTP7) 0.07 Orthogroups_2024-Update
Solyc05g008190 No alias Transducin/WD40 repeat-like superfamily protein (AHRD... 0.09 Orthogroups_2024-Update
evm.model.contig_611.6 No alias (at3g10530 : 299.0) Transducin/WD40 repeat-like... 0.03 Orthogroups_2024-Update
evm.model.tig00001366.4 No alias (at3g10530 : 195.0) Transducin/WD40 repeat-like... 0.09 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001680 WD40_repeat 275 305
IPR012952 BING4_C_dom 353 431
No external refs found!