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  5. Sopen05g009850

Sopen05g009850


Description : DEAD/DEAH box helicase


Gene families : OG_42_0008378 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0008378_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen05g009850
Cluster HCCA clusters: Cluster_68

Target Alias Description ECC score Gene Family Method Actions
Glyma.08G102300 No alias DEAD/DEAH box RNA helicase family protein 0.05 Orthogroups_2024-Update
Kfl00050_0180 kfl00050_0180_v1.1 (at1g27880 : 512.0) DEAD/DEAH box RNA helicase family... 0.03 Orthogroups_2024-Update
Solyc05g014690 No alias RNA helicase DEAH-box14 0.07 Orthogroups_2024-Update
evm.model.tig00000789.41 No alias (at1g27880 : 173.0) DEAD/DEAH box RNA helicase family... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA InterProScan predictions
MF GO:0005524 ATP binding IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001650 Helicase_C 550 646
IPR011545 DEAD/DEAH_box_helicase_dom 340 500
No external refs found!