Sopen05g012450


Description : MuDR family transposase


Gene families : OG_42_0000284 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000284_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen05g012450
Cluster HCCA clusters: Cluster_25

Target Alias Description ECC score Gene Family Method Actions
Solyc02g014710 No alias No description available 0.02 Orthogroups_2024-Update
Solyc05g014520 No alias No description available 0.03 Orthogroups_2024-Update
Sopen05g008970 No alias MuDR family transposase 0.03 Orthogroups_2024-Update
Sopen06g017430 No alias MULE transposase domain 0.02 Orthogroups_2024-Update
Sopen07g020390 No alias MULE transposase domain 0.04 Orthogroups_2024-Update
Sopen08g008550 No alias MULE transposase domain 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA InterProScan predictions
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR007527 Znf_SWIM 587 617
IPR004332 Transposase_MuDR 327 385
No external refs found!