1. Home
  2. Species
  3. Pseudotsuga menziesii
  4. Sequence
  5. PSME_00000669-RA

PSME_00000669-RA


Description : (at2g28470 : 320.0) putative beta-galactosidase (BGAL8 gene); beta-galactosidase 8 (BGAL8); FUNCTIONS IN: cation binding, sugar binding, beta-galactosidase activity, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 35, conserved site (InterPro:IPR019801), Glycoside hydrolase, family 35 (InterPro:IPR001944), D-galactoside/L-rhamnose binding SUEL lectin (InterPro:IPR000922), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781), Galactose-binding domain-like (InterPro:IPR008979); BEST Arabidopsis thaliana protein match is: beta galactosidase 1 (TAIR:AT3G13750.1). & (p45582|bgal_aspof : 316.0) Beta-galactosidase precursor (EC 3.2.1.23) (Lactase) - Asparagus officinalis (Garden asparagus) & (reliability: 640.0) & (original description: no original description)


Gene families : OG_42_0000109 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000109_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00000669-RA
Cluster HCCA clusters: Cluster_227

Target Alias Description ECC score Gene Family Method Actions
A4A49_07022 No alias beta-galactosidase 7 0.03 Orthogroups_2024-Update
Glyma.07G010400 No alias beta galactosidase 1 0.03 Orthogroups_2024-Update
Glyma.13G112300 No alias beta-galactosidase 7 0.02 Orthogroups_2024-Update
Glyma.17G047401 No alias beta-galactosidase 15 0.04 Orthogroups_2024-Update
HORVU3Hr1G081960.9 No alias 1,2-beta-galactosidase & EC_3.2 glycosylase 0.04 Orthogroups_2024-Update
MA_72251g0010 No alias (at2g28470 : 966.0) putative beta-galactosidase (BGAL8... 0.03 Orthogroups_2024-Update
PSME_00005883-RA No alias (at4g36360 : 486.0) putative beta-galactosidase (BGAL3... 0.05 Orthogroups_2024-Update
PSME_00010317-RA No alias (at4g36360 : 514.0) putative beta-galactosidase (BGAL3... 0.03 Orthogroups_2024-Update
PSME_00025599-RA No alias (at5g63810 : 95.1) member of Glycoside Hydrolase Family... 0.03 Orthogroups_2024-Update
PSME_00043367-RA No alias (at5g63810 : 100.0) member of Glycoside Hydrolase Family... 0.03 Orthogroups_2024-Update
Pp1s10_144V6 No alias beta-galactosidase 0.02 Orthogroups_2024-Update
Solyc03g121540 No alias beta-galactosidase 3 0.03 Orthogroups_2024-Update
Sopen01g053580 No alias Glycosyl hydrolases family 35 0.03 Orthogroups_2024-Update
Sopen02g023760 No alias Glycosyl hydrolases family 35 0.03 Orthogroups_2024-Update
Sopen03g029730 No alias Glycosyl hydrolases family 35 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005506 iron ion binding IEA InterProScan predictions
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEA InterProScan predictions
MF GO:0020037 heme binding IEA InterProScan predictions
BP GO:0055114 oxidation-reduction process IEA InterProScan predictions
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000155 phosphorelay sensor kinase activity IEP Predicted GO
MF GO:0004425 indole-3-glycerol-phosphate synthase activity IEP Predicted GO
MF GO:0004673 protein histidine kinase activity IEP Predicted GO
MF GO:0005515 protein binding IEP Predicted GO
BP GO:0006766 vitamin metabolic process IEP Predicted GO
BP GO:0006767 water-soluble vitamin metabolic process IEP Predicted GO
BP GO:0006771 riboflavin metabolic process IEP Predicted GO
BP GO:0007165 signal transduction IEP Predicted GO
BP GO:0009110 vitamin biosynthetic process IEP Predicted GO
BP GO:0009231 riboflavin biosynthetic process IEP Predicted GO
BP GO:0009314 response to radiation IEP Predicted GO
CC GO:0009349 riboflavin synthase complex IEP Predicted GO
BP GO:0009416 response to light stimulus IEP Predicted GO
BP GO:0009581 detection of external stimulus IEP Predicted GO
BP GO:0009582 detection of abiotic stimulus IEP Predicted GO
BP GO:0009583 detection of light stimulus IEP Predicted GO
BP GO:0009584 detection of visible light IEP Predicted GO
BP GO:0009605 response to external stimulus IEP Predicted GO
BP GO:0009628 response to abiotic stimulus IEP Predicted GO
MF GO:0016775 phosphotransferase activity, nitrogenous group as acceptor IEP Predicted GO
BP GO:0018298 protein-chromophore linkage IEP Predicted GO
BP GO:0042364 water-soluble vitamin biosynthetic process IEP Predicted GO
BP GO:0042726 flavin-containing compound metabolic process IEP Predicted GO
BP GO:0042727 flavin-containing compound biosynthetic process IEP Predicted GO
BP GO:0050896 response to stimulus IEP Predicted GO
BP GO:0051606 detection of stimulus IEP Predicted GO
InterPro domains Description Start Stop
IPR031330 Gly_Hdrlase_35_cat 3 97
IPR001128 Cyt_P450 339 413
No external refs found!