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  5. PSME_00000827-RA

PSME_00000827-RA


Description : (at5g40380 : 313.0) Encodes a cysteine-rich receptor-like protein kinase.; cysteine-rich RLK (RECEPTOR-like protein kinase) 42 (CRK42); FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Protein of unknown function DUF26 (InterPro:IPR002902), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: cysteine-rich RLK (RECEPTOR-like protein kinase) 3 (TAIR:AT1G70530.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (q8l4h4|nork_medtr : 171.0) Nodulation receptor kinase precursor (EC 2.7.11.1) (Does not make infections protein 2) (Symbiosis receptor-like kinase) (MtSYMRK) - Medicago truncatula (Barrel medic) & (reliability: 626.0) & (original description: no original description)


Gene families : OG_42_0000508 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000508_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00000827-RA
Cluster HCCA clusters: Cluster_40

Target Alias Description ECC score Gene Family Method Actions
A4A49_31526 No alias cysteine-rich receptor-like protein kinase 2 0.03 Orthogroups_2024-Update
Glyma.05G005100 No alias cysteine-rich RLK (RECEPTOR-like protein kinase) 42 0.02 Orthogroups_2024-Update
HORVU3Hr1G017430.1 No alias Unknown function 0.02 Orthogroups_2024-Update
MA_10425981g0010 No alias (at3g22060 : 102.0) contains Pfam profile: PF01657... 0.03 Orthogroups_2024-Update
MA_10426022g0020 No alias (at3g22060 : 121.0) contains Pfam profile: PF01657... 0.03 Orthogroups_2024-Update
MA_52135g0010 No alias (at4g23150 : 311.0) Encodes a cysteine-rich... 0.03 Orthogroups_2024-Update
MA_6276737g0010 No alias (at3g22060 : 106.0) contains Pfam profile: PF01657... 0.03 Orthogroups_2024-Update
MA_700325g0010 No alias (at1g70520 : 417.0) Encodes a cysteine-rich... 0.03 Orthogroups_2024-Update
PSME_00003034-RA No alias (at1g70520 : 315.0) Encodes a cysteine-rich... 0.03 Orthogroups_2024-Update
PSME_00007602-RA No alias (at1g70520 : 372.0) Encodes a cysteine-rich... 0.03 Orthogroups_2024-Update
PSME_00012001-RA No alias (at1g70520 : 365.0) Encodes a cysteine-rich... 0.05 Orthogroups_2024-Update
PSME_00016668-RA No alias (at1g70520 : 261.0) Encodes a cysteine-rich... 0.04 Orthogroups_2024-Update
PSME_00018124-RA No alias (at1g70520 : 437.0) Encodes a cysteine-rich... 0.04 Orthogroups_2024-Update
PSME_00021359-RA No alias (at1g70520 : 404.0) Encodes a cysteine-rich... 0.04 Orthogroups_2024-Update
PSME_00022260-RA No alias (at1g70520 : 384.0) Encodes a cysteine-rich... 0.04 Orthogroups_2024-Update
PSME_00040044-RA No alias (at1g70520 : 377.0) Encodes a cysteine-rich... 0.04 Orthogroups_2024-Update
PSME_00043324-RA No alias (at1g70520 : 207.0) Encodes a cysteine-rich... 0.04 Orthogroups_2024-Update
PSME_00043565-RA No alias (at1g70520 : 214.0) Encodes a cysteine-rich... 0.04 Orthogroups_2024-Update
PSME_00046310-RA No alias (at3g22060 : 113.0) contains Pfam profile: PF01657... 0.05 Orthogroups_2024-Update
Solyc01g007960 No alias Kinase family protein (AHRD V3.3 *** B9HTV7_POPTR) 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0004672 protein kinase activity IEA InterProScan predictions
MF GO:0005524 ATP binding IEA InterProScan predictions
BP GO:0006468 protein phosphorylation IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0004602 glutathione peroxidase activity IEP Predicted GO
MF GO:0004637 phosphoribosylamine-glycine ligase activity IEP Predicted GO
MF GO:0005507 copper ion binding IEP Predicted GO
BP GO:0006144 purine nucleobase metabolic process IEP Predicted GO
MF GO:0008131 primary amine oxidase activity IEP Predicted GO
MF GO:0008964 phosphoenolpyruvate carboxylase activity IEP Predicted GO
BP GO:0009112 nucleobase metabolic process IEP Predicted GO
BP GO:0009113 purine nucleobase biosynthetic process IEP Predicted GO
BP GO:0009308 amine metabolic process IEP Predicted GO
BP GO:0015977 carbon fixation IEP Predicted GO
BP GO:0016197 endosomal transport IEP Predicted GO
BP GO:0016482 cytosolic transport IEP Predicted GO
MF GO:0016638 oxidoreductase activity, acting on the CH-NH2 group of donors IEP Predicted GO
MF GO:0016641 oxidoreductase activity, acting on the CH-NH2 group of donors, oxygen as acceptor IEP Predicted GO
MF GO:0016757 transferase activity, transferring glycosyl groups IEP Predicted GO
MF GO:0016758 transferase activity, transferring hexosyl groups IEP Predicted GO
MF GO:0016829 lyase activity IEP Predicted GO
CC GO:0030906 retromer, cargo-selective complex IEP Predicted GO
BP GO:0042147 retrograde transport, endosome to Golgi IEP Predicted GO
BP GO:0042440 pigment metabolic process IEP Predicted GO
MF GO:0043531 ADP binding IEP Predicted GO
BP GO:0046112 nucleobase biosynthetic process IEP Predicted GO
BP GO:0046148 pigment biosynthetic process IEP Predicted GO
MF GO:0048038 quinone binding IEP Predicted GO
InterPro domains Description Start Stop
IPR002902 GNK2 52 138
IPR000719 Prot_kinase_dom 335 554
No external refs found!