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  5. PSME_00000871-RA

PSME_00000871-RA


Description : (at1g27750 : 80.5) nucleic acid binding; FUNCTIONS IN: nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: Spen paralogue and orthologue SPOC, C-terminal (InterPro:IPR012921), RNA recognition motif, RNP-1 (InterPro:IPR000504); Has 48205 Blast hits to 29216 proteins in 1385 species: Archae - 84; Bacteria - 5862; Metazoa - 21406; Fungi - 6566; Plants - 7294; Viruses - 1352; Other Eukaryotes - 5641 (source: NCBI BLink). & (reliability: 161.0) & (original description: no original description)


Gene families : OG_42_0006261 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0006261_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood Pseudotsuga release: PSME_00000871-RA
Cluster HCCA clusters: Cluster_106

Target Alias Description ECC score Gene Family Method Actions
Cre09.g398030 No alias nucleic acid binding 0.01 Orthogroups_2024-Update
Potri.014G017000 No alias nucleic acid binding 0.02 Orthogroups_2024-Update
Sobic.003G307000.2 No alias Unknown function 0.05 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003712 transcription coregulator activity IEP Predicted GO
MF GO:0004402 histone acetyltransferase activity IEP Predicted GO
MF GO:0008080 N-acetyltransferase activity IEP Predicted GO
MF GO:0008641 ubiquitin-like modifier activating enzyme activity IEP Predicted GO
MF GO:0016407 acetyltransferase activity IEP Predicted GO
MF GO:0016410 N-acyltransferase activity IEP Predicted GO
BP GO:0016567 protein ubiquitination IEP Predicted GO
MF GO:0016877 ligase activity, forming carbon-sulfur bonds IEP Predicted GO
BP GO:0032446 protein modification by small protein conjugation IEP Predicted GO
MF GO:0034212 peptide N-acetyltransferase activity IEP Predicted GO
MF GO:0061733 peptide-lysine-N-acetyltransferase activity IEP Predicted GO
InterPro domains Description Start Stop
IPR012921 SPOC_C 81 159
No external refs found!