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  5. PSME_00000922-RA

PSME_00000922-RA


Description : (at4g33840 : 474.0) Glycosyl hydrolase family 10 protein; FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 10 (InterPro:IPR001000), Carbohydrate-binding, CenC-like (InterPro:IPR003305), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781), Galactose-binding domain-like (InterPro:IPR008979); BEST Arabidopsis thaliana protein match is: Glycosyl hydrolase family 10 protein (TAIR:AT4G33830.1); Has 2042 Blast hits to 2029 proteins in 439 species: Archae - 10; Bacteria - 1163; Metazoa - 20; Fungi - 357; Plants - 275; Viruses - 0; Other Eukaryotes - 217 (source: NCBI BLink). & (reliability: 948.0) & (original description: no original description)


Gene families : OG_42_0000885 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000885_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00000922-RA
Cluster HCCA clusters: Cluster_10

Target Alias Description ECC score Gene Family Method Actions
420481 No alias Glycosyl hydrolase family 10 protein 0.02 Orthogroups_2024-Update
A4A49_27880 No alias hypothetical protein 0.03 Orthogroups_2024-Update
At4g33810 No alias Glycosyl hydrolase superfamily protein... 0.03 Orthogroups_2024-Update
Bradi1g71077 No alias Glycosyl hydrolase family 10 protein 0.02 Orthogroups_2024-Update
Potri.004G173300 No alias Glycosyl hydrolase family 10 protein 0.03 Orthogroups_2024-Update
Seita.9G273800.1 No alias Unknown function 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEA InterProScan predictions
BP GO:0005975 carbohydrate metabolic process IEA InterProScan predictions
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEP Predicted GO
MF GO:0005506 iron ion binding IEP Predicted GO
BP GO:0006952 defense response IEP Predicted GO
MF GO:0008194 UDP-glycosyltransferase activity IEP Predicted GO
MF GO:0008234 cysteine-type peptidase activity IEP Predicted GO
MF GO:0010333 terpene synthase activity IEP Predicted GO
MF GO:0016835 carbon-oxygen lyase activity IEP Predicted GO
MF GO:0016838 carbon-oxygen lyase activity, acting on phosphates IEP Predicted GO
MF GO:0035251 UDP-glucosyltransferase activity IEP Predicted GO
MF GO:0043169 cation binding IEP Predicted GO
MF GO:0046872 metal ion binding IEP Predicted GO
InterPro domains Description Start Stop
IPR001000 GH10 212 470
IPR003305 CenC_carb-bd 60 185
No external refs found!