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  5. PSME_00001830-RA

PSME_00001830-RA


Description : (at5g59850 : 244.0) Ribosomal protein S8 family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation; LOCATED IN: cytosolic small ribosomal subunit, cell wall, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Ribosomal protein S8 (InterPro:IPR000630); BEST Arabidopsis thaliana protein match is: ribosomal protein S15A (TAIR:AT1G07770.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q9at34|rs15a_dauca : 241.0) 40S ribosomal protein S15a - Daucus carota (Carrot) & (reliability: 488.0) & (original description: no original description)


Gene families : OG_42_0001161 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001161_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00001830-RA
Cluster HCCA clusters: Cluster_117

Target Alias Description ECC score Gene Family Method Actions
228163 No alias Ribosomal protein S8 family protein 0.04 Orthogroups_2024-Update
Bradi2g23110 No alias ribosomal protein S15A 0.02 Orthogroups_2024-Update
Bradi2g54450 No alias ribosomal protein S15A 0.03 Orthogroups_2024-Update
Brara.B01062.1 No alias component *(uS8) of small ribosomal-subunit (SSU) proteome 0.06 Orthogroups_2024-Update
Brara.C01067.1 No alias component *(uS8) of small ribosomal-subunit (SSU) proteome 0.09 Orthogroups_2024-Update
Brara.F00468.1 No alias component *(uS8) of small ribosomal-subunit (SSU) proteome 0.03 Orthogroups_2024-Update
Brara.J01354.1 No alias component *(uS8) of small ribosomal-subunit (SSU) proteome 0.03 Orthogroups_2024-Update
Cre05.g234637 No alias Ribosomal protein S8 family protein 0.08 Orthogroups_2024-Update
GRMZM2G083497 No alias ribosomal protein S15A 0.03 Orthogroups_2024-Update
Glyma.15G102550 No alias ribosomal protein S15A 0.04 Orthogroups_2024-Update
Glyma.17G018600 No alias ribosomal protein S15A 0.07 Orthogroups_2024-Update
HORVU1Hr1G072060.1 No alias component *(uS8) of small ribosomal-subunit (SSU) proteome 0.03 Orthogroups_2024-Update
HORVU3Hr1G086930.1 No alias component *(uS8) of small ribosomal-subunit (SSU) proteome 0.03 Orthogroups_2024-Update
Kfl00864_0040 kfl00864_0040_v1.1 (at5g59850 : 230.0) Ribosomal protein S8 family protein;... 0.04 Orthogroups_2024-Update
LOC_Os02g27760 No alias 40S ribosomal protein S15a, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os07g10720 No alias 40S ribosomal protein S15a, putative, expressed 0.02 Orthogroups_2024-Update
MA_10427318g0020 No alias (at3g46040 : 214.0) Regulated by TCP20.; ribosomal... 0.05 Orthogroups_2024-Update
MA_57835g0010 No alias (at3g46040 : 223.0) Regulated by TCP20.; ribosomal... 0.04 Orthogroups_2024-Update
Mp8g06510.1 No alias component RPS15a of SSU proteome 0.02 Orthogroups_2024-Update
Mp8g13010.1 No alias component RPS15a of SSU proteome 0.03 Orthogroups_2024-Update
Potri.001G118100 No alias ribosomal protein S15A 0.04 Orthogroups_2024-Update
Pp1s115_101V6 No alias 40s ribosomal protein s15a 0.05 Orthogroups_2024-Update
Pp1s426_18V6 No alias 40s ribosomal protein s15a 0.02 Orthogroups_2024-Update
Pp1s45_88V6 No alias 40s ribosomal protein s15a 0.04 Orthogroups_2024-Update
Sobic.003G012700.1 No alias component *(uS8) of small ribosomal-subunit (SSU) proteome 0.04 Orthogroups_2024-Update
Sobic.007G212600.1 No alias component *(uS8) of small ribosomal-subunit (SSU) proteome 0.05 Orthogroups_2024-Update
Sopen04g025860 No alias Ribosomal protein S8 0.04 Orthogroups_2024-Update
Sopen04g026010 No alias Ribosomal protein S8 0.03 Orthogroups_2024-Update
Sopen04g026020 No alias Ribosomal protein S8 0.06 Orthogroups_2024-Update
evm.model.contig_2045.5 No alias (at5g59850 : 190.0) Ribosomal protein S8 family protein;... 0.11 Orthogroups_2024-Update
evm.model.tig00000158.110 No alias (q9at34|rs15a_dauca : 210.0) 40S ribosomal protein S15a... 0.06 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA InterProScan predictions
CC GO:0005840 ribosome IEA InterProScan predictions
BP GO:0006412 translation IEA InterProScan predictions
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Type GO Term Name Evidence Source
BP GO:0000105 histidine biosynthetic process IEP Predicted GO
BP GO:0000271 polysaccharide biosynthetic process IEP Predicted GO
BP GO:0000375 RNA splicing, via transesterification reactions IEP Predicted GO
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP Predicted GO
BP GO:0000398 mRNA splicing, via spliceosome IEP Predicted GO
MF GO:0001882 nucleoside binding IEP Predicted GO
MF GO:0001883 purine nucleoside binding IEP Predicted GO
MF GO:0003924 GTPase activity IEP Predicted GO
MF GO:0004345 glucose-6-phosphate dehydrogenase activity IEP Predicted GO
MF GO:0004399 histidinol dehydrogenase activity IEP Predicted GO
MF GO:0004864 protein phosphatase inhibitor activity IEP Predicted GO
MF GO:0005096 GTPase activator activity IEP Predicted GO
MF GO:0005525 GTP binding IEP Predicted GO
CC GO:0005622 intracellular IEP Predicted GO
CC GO:0005741 mitochondrial outer membrane IEP Predicted GO
CC GO:0005787 signal peptidase complex IEP Predicted GO
CC GO:0005789 endoplasmic reticulum membrane IEP Predicted GO
BP GO:0005996 monosaccharide metabolic process IEP Predicted GO
BP GO:0006006 glucose metabolic process IEP Predicted GO
BP GO:0006397 mRNA processing IEP Predicted GO
BP GO:0006465 signal peptide processing IEP Predicted GO
BP GO:0006547 histidine metabolic process IEP Predicted GO
BP GO:0006605 protein targeting IEP Predicted GO
BP GO:0006801 superoxide metabolic process IEP Predicted GO
MF GO:0008047 enzyme activator activity IEP Predicted GO
BP GO:0008380 RNA splicing IEP Predicted GO
BP GO:0009250 glucan biosynthetic process IEP Predicted GO
BP GO:0009966 regulation of signal transduction IEP Predicted GO
BP GO:0010646 regulation of cell communication IEP Predicted GO
BP GO:0010921 regulation of phosphatase activity IEP Predicted GO
BP GO:0016071 mRNA metabolic process IEP Predicted GO
MF GO:0016462 pyrophosphatase activity IEP Predicted GO
CC GO:0016469 proton-transporting two-sector ATPase complex IEP Predicted GO
CC GO:0016471 vacuolar proton-transporting V-type ATPase complex IEP Predicted GO
BP GO:0016485 protein processing IEP Predicted GO
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP Predicted GO
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP Predicted GO
MF GO:0016759 cellulose synthase activity IEP Predicted GO
MF GO:0016760 cellulose synthase (UDP-forming) activity IEP Predicted GO
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Predicted GO
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Predicted GO
MF GO:0017111 nucleoside-triphosphatase activity IEP Predicted GO
MF GO:0019001 guanyl nucleotide binding IEP Predicted GO
MF GO:0019208 phosphatase regulator activity IEP Predicted GO
MF GO:0019212 phosphatase inhibitor activity IEP Predicted GO
BP GO:0019318 hexose metabolic process IEP Predicted GO
CC GO:0019867 outer membrane IEP Predicted GO
MF GO:0019888 protein phosphatase regulator activity IEP Predicted GO
BP GO:0023051 regulation of signaling IEP Predicted GO
MF GO:0030234 enzyme regulator activity IEP Predicted GO
BP GO:0030243 cellulose metabolic process IEP Predicted GO
BP GO:0030244 cellulose biosynthetic process IEP Predicted GO
CC GO:0030532 small nuclear ribonucleoprotein complex IEP Predicted GO
MF GO:0030695 GTPase regulator activity IEP Predicted GO
CC GO:0031968 organelle outer membrane IEP Predicted GO
MF GO:0032549 ribonucleoside binding IEP Predicted GO
MF GO:0032550 purine ribonucleoside binding IEP Predicted GO
MF GO:0032561 guanyl ribonucleotide binding IEP Predicted GO
CC GO:0033176 proton-transporting V-type ATPase complex IEP Predicted GO
BP GO:0033692 cellular polysaccharide biosynthetic process IEP Predicted GO
BP GO:0035303 regulation of dephosphorylation IEP Predicted GO
BP GO:0035304 regulation of protein dephosphorylation IEP Predicted GO
BP GO:0043666 regulation of phosphoprotein phosphatase activity IEP Predicted GO
CC GO:0044422 organelle part IEP Predicted GO
CC GO:0044428 nuclear part IEP Predicted GO
CC GO:0044432 endoplasmic reticulum part IEP Predicted GO
CC GO:0044437 vacuolar part IEP Predicted GO
CC GO:0044446 intracellular organelle part IEP Predicted GO
CC GO:0046540 U4/U6 x U5 tri-snRNP complex IEP Predicted GO
BP GO:0048583 regulation of response to stimulus IEP Predicted GO
MF GO:0050661 NADP binding IEP Predicted GO
BP GO:0051273 beta-glucan metabolic process IEP Predicted GO
BP GO:0051274 beta-glucan biosynthetic process IEP Predicted GO
BP GO:0051336 regulation of hydrolase activity IEP Predicted GO
BP GO:0051604 protein maturation IEP Predicted GO
BP GO:0052803 imidazole-containing compound metabolic process IEP Predicted GO
BP GO:0072593 reactive oxygen species metabolic process IEP Predicted GO
CC GO:0097525 spliceosomal snRNP complex IEP Predicted GO
CC GO:0097526 spliceosomal tri-snRNP complex IEP Predicted GO
CC GO:0098805 whole membrane IEP Predicted GO
CC GO:0120114 Sm-like protein family complex IEP Predicted GO
CC GO:1905368 peptidase complex IEP Predicted GO
InterPro domains Description Start Stop
IPR000630 Ribosomal_S8 123 246
No external refs found!