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  5. PSME_00002441-RA

PSME_00002441-RA


Description : (at5g42400 : 337.0) Encodes ATXR7 (ARABIDOPSIS TRITHORAX-RELATED7), required for histone H3-K4 methylation and for transcriptional activation of Flowering Locus C.; SET domain protein 25 (SDG25); CONTAINS InterPro DOMAIN/s: SET domain (InterPro:IPR001214), GYF (InterPro:IPR003169); BEST Arabidopsis thaliana protein match is: homologue of trithorax (TAIR:AT2G31650.1); Has 5838 Blast hits to 5683 proteins in 501 species: Archae - 3; Bacteria - 461; Metazoa - 2434; Fungi - 507; Plants - 1016; Viruses - 2; Other Eukaryotes - 1415 (source: NCBI BLink). & (q8s4p5|ez2_maize : 102.0) Polycomb protein EZ2 (Enhancer of zeste protein 2) - Zea mays (Maize) & (reliability: 674.0) & (original description: no original description)


Gene families : OG_42_0005339 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0005339_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00002441-RA
Cluster HCCA clusters: Cluster_229

Target Alias Description ECC score Gene Family Method Actions
At5g42400 No alias SET domain protein 25 [Source:TAIR;Acc:AT5G42400] 0.03 Orthogroups_2024-Update
Kfl00067_0030 kfl00067_0030_v1.1 (at5g42400 : 213.0) Encodes ATXR7 (ARABIDOPSIS... 0.02 Orthogroups_2024-Update
Mp1g17790.1 No alias class III/Trithorax histone methyltransferase component... 0.03 Orthogroups_2024-Update
Pp1s101_4V6 No alias histone h3 methyltransferasesubunit set1 0.05 Orthogroups_2024-Update
Seita.3G394700.1 No alias class-III histone methyltransferase *(Trx) 0.04 Orthogroups_2024-Update
evm.model.contig_2059.3 No alias (at5g42400 : 144.0) Encodes ATXR7 (ARABIDOPSIS... 0.01 Orthogroups_2024-Update
evm.model.contig_2108.6 No alias (at5g42400 : 123.0) Encodes ATXR7 (ARABIDOPSIS... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0000155 phosphorelay sensor kinase activity IEP Predicted GO
MF GO:0003774 motor activity IEP Predicted GO
MF GO:0004673 protein histidine kinase activity IEP Predicted GO
MF GO:0005096 GTPase activator activity IEP Predicted GO
BP GO:0005991 trehalose metabolic process IEP Predicted GO
BP GO:0005992 trehalose biosynthetic process IEP Predicted GO
MF GO:0008047 enzyme activator activity IEP Predicted GO
BP GO:0009312 oligosaccharide biosynthetic process IEP Predicted GO
BP GO:0016051 carbohydrate biosynthetic process IEP Predicted GO
CC GO:0016459 myosin complex IEP Predicted GO
MF GO:0016775 phosphotransferase activity, nitrogenous group as acceptor IEP Predicted GO
MF GO:0030695 GTPase regulator activity IEP Predicted GO
BP GO:0034637 cellular carbohydrate biosynthetic process IEP Predicted GO
MF GO:0042393 histone binding IEP Predicted GO
BP GO:0046351 disaccharide biosynthetic process IEP Predicted GO
MF GO:0060589 nucleoside-triphosphatase regulator activity IEP Predicted GO
InterPro domains Description Start Stop
IPR003169 GYF 437 473
IPR001214 SET_dom 1427 1531
No external refs found!