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- PSME_00002997-RA
PSME_00002997-RA
Description : (at3g09100 : 725.0) mRNA capping enzyme family protein; FUNCTIONS IN: in 7 functions; INVOLVED IN: in 7 processes; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Nucleic acid-binding, OB-fold (InterPro:IPR012340), Dual-specific/protein-tyrosine phosphatase, conserved region (InterPro:IPR000387), Dual specificity phosphatase, subgroup, catalytic domain (InterPro:IPR020422), ATP dependent DNA ligase, central (InterPro:IPR012310), mRNA capping enzyme (InterPro:IPR001339), mRNA capping enzyme, bifunctional (InterPro:IPR017074), Protein-tyrosine phosphatase, active site (InterPro:IPR016130), Nucleic acid-binding, OB-fold-like (InterPro:IPR016027), Dual specificity phosphatase, catalytic domain (InterPro:IPR000340), mRNA capping enzyme, C-terminal (InterPro:IPR013846); BEST Arabidopsis thaliana protein match is: mRNA capping enzyme family protein (TAIR:AT5G01290.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 1384.0) & (original description: no original description)
Expression Profile
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Co-expression Networks
Type | Description | Actions |
Neighborhood | Pseudotsuga release: PSME_00002997-RA | |
Cluster | HCCA clusters: Cluster_97 | |
Expression Context Conservation (ECC)
Target | Alias | Description | ECC score | Gene Family Method | Actions |
Bradi4g22137 | No alias | mRNA capping enzyme family protein | 0.04 | Orthogroups_2024-Update | |
Cre07.g319150 | No alias | mRNA capping enzyme family protein | 0.02 | Orthogroups_2024-Update | |
Mp7g13300.1 | No alias | mRNA capping enzyme | 0.02 | Orthogroups_2024-Update | |
Functional Annotation
Type | GO Term | Name | Evidence | Source |
MF | GO:0003674 | molecular_function | None | Extended |
MF | GO:0003824 | catalytic activity | None | Extended |
MF | GO:0004484 | mRNA guanylyltransferase activity | IEA | InterProScan predictions |
MF | GO:0004721 | phosphoprotein phosphatase activity | None | Extended |
BP | GO:0006139 | nucleobase-containing compound metabolic process | None | Extended |
BP | GO:0006370 | 7-methylguanosine mRNA capping | IEA | InterProScan predictions |
BP | GO:0006396 | RNA processing | None | Extended |
BP | GO:0006397 | mRNA processing | None | Extended |
BP | GO:0006725 | cellular aromatic compound metabolic process | None | Extended |
BP | GO:0006793 | phosphorus metabolic process | None | Extended |
BP | GO:0006796 | phosphate-containing compound metabolic process | None | Extended |
BP | GO:0006807 | nitrogen compound metabolic process | None | Extended |
MF | GO:0008138 | protein tyrosine/serine/threonine phosphatase activity | IEA | InterProScan predictions |
BP | GO:0008150 | biological_process | None | Extended |
BP | GO:0008152 | metabolic process | None | Extended |
MF | GO:0008192 | RNA guanylyltransferase activity | None | Extended |
BP | GO:0009452 | 7-methylguanosine RNA capping | None | Extended |
BP | GO:0009987 | cellular process | None | Extended |
BP | GO:0016070 | RNA metabolic process | None | Extended |
BP | GO:0016071 | mRNA metabolic process | None | Extended |
BP | GO:0016311 | dephosphorylation | IEA | InterProScan predictions |
MF | GO:0016740 | transferase activity | None | Extended |
MF | GO:0016772 | transferase activity, transferring phosphorus-containing groups | None | Extended |
MF | GO:0016779 | nucleotidyltransferase activity | None | Extended |
MF | GO:0016787 | hydrolase activity | None | Extended |
MF | GO:0016788 | hydrolase activity, acting on ester bonds | None | Extended |
MF | GO:0016791 | phosphatase activity | None | Extended |
BP | GO:0034641 | cellular nitrogen compound metabolic process | None | Extended |
BP | GO:0036260 | RNA capping | None | Extended |
MF | GO:0042578 | phosphoric ester hydrolase activity | None | Extended |
BP | GO:0043170 | macromolecule metabolic process | None | Extended |
BP | GO:0044237 | cellular metabolic process | None | Extended |
BP | GO:0044238 | primary metabolic process | None | Extended |
BP | GO:0046483 | heterocycle metabolic process | None | Extended |
MF | GO:0070568 | guanylyltransferase activity | None | Extended |
BP | GO:0071704 | organic substance metabolic process | None | Extended |
BP | GO:0090304 | nucleic acid metabolic process | None | Extended |
MF | GO:0140096 | catalytic activity, acting on a protein | None | Extended |
BP | GO:1901360 | organic cyclic compound metabolic process | None | Extended |
Type | GO Term | Name | Evidence | Source |
BP | GO:0000726 | non-recombinational repair | IEP | Predicted GO |
MF | GO:0004175 | endopeptidase activity | IEP | Predicted GO |
MF | GO:0004525 | ribonuclease III activity | IEP | Predicted GO |
MF | GO:0004559 | alpha-mannosidase activity | IEP | Predicted GO |
BP | GO:0006013 | mannose metabolic process | IEP | Predicted GO |
BP | GO:0006281 | DNA repair | IEP | Predicted GO |
BP | GO:0006302 | double-strand break repair | IEP | Predicted GO |
BP | GO:0006303 | double-strand break repair via nonhomologous end joining | IEP | Predicted GO |
BP | GO:0006357 | regulation of transcription by RNA polymerase II | IEP | Predicted GO |
BP | GO:0006974 | cellular response to DNA damage stimulus | IEP | Predicted GO |
MF | GO:0015923 | mannosidase activity | IEP | Predicted GO |
MF | GO:0016538 | cyclin-dependent protein serine/threonine kinase regulator activity | IEP | Predicted GO |
CC | GO:0016592 | mediator complex | IEP | Predicted GO |
MF | GO:0016874 | ligase activity | IEP | Predicted GO |
MF | GO:0019207 | kinase regulator activity | IEP | Predicted GO |
MF | GO:0019887 | protein kinase regulator activity | IEP | Predicted GO |
MF | GO:0032296 | double-stranded RNA-specific ribonuclease activity | IEP | Predicted GO |
BP | GO:0033554 | cellular response to stress | IEP | Predicted GO |
BP | GO:0051716 | cellular response to stimulus | IEP | Predicted GO |
MF | GO:0140098 | catalytic activity, acting on RNA | IEP | Predicted GO |
InterPro domains | Description | Start | Stop |
IPR000340 | Dual-sp_phosphatase_cat-dom | 148 | 271 |
IPR013846 | mRNA_cap_enzyme_C | 564 | 647 |
IPR001339 | mRNA_cap_enzyme | 363 | 555 |