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  5. PSME_00003323-RA

PSME_00003323-RA


Description : (at3g24120 : 251.0) Homeodomain-like superfamily protein; CONTAINS InterPro DOMAIN/s: Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: Homeodomain-like superfamily protein (TAIR:AT4G13640.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 502.0) & (original description: no original description)


Gene families : OG_42_0000021 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000021_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00003323-RA
Cluster HCCA clusters: Cluster_90

Target Alias Description ECC score Gene Family Method Actions
405399 No alias myb-like HTH transcriptional regulator family protein 0.03 Orthogroups_2024-Update
A4A49_37335 No alias protein phr1-like 3 0.02 Orthogroups_2024-Update
AC234155.1_FG002 No alias Homeodomain-like superfamily protein 0.03 Orthogroups_2024-Update
At1g32240 No alias Probable transcription factor KAN2... 0.03 Orthogroups_2024-Update
At5g16560 No alias Transcription repressor KAN1... 0.03 Orthogroups_2024-Update
Bradi2g21407 No alias myb-like HTH transcriptional regulator family protein 0.03 Orthogroups_2024-Update
Bradi3g36710 No alias Homeodomain-like superfamily protein 0.02 Orthogroups_2024-Update
Brara.A03315.1 No alias GARP subgroup PHL transcription factor 0.02 Orthogroups_2024-Update
Brara.B03086.1 No alias transcription factor *(CLAUSA) 0.02 Orthogroups_2024-Update
Brara.F00986.1 No alias transcription factor *(CLAUSA) 0.02 Orthogroups_2024-Update
Brara.I01162.1 No alias GARP subgroup PHL transcription factor & transcription... 0.03 Orthogroups_2024-Update
GRMZM2G069525 No alias Homeodomain-like superfamily protein 0.05 Orthogroups_2024-Update
GRMZM2G090230 No alias Homeodomain-like superfamily protein 0.03 Orthogroups_2024-Update
GRMZM2G175827 No alias Homeodomain-like superfamily protein 0.02 Orthogroups_2024-Update
Glyma.03G003500 No alias myb-like HTH transcriptional regulator family protein 0.02 Orthogroups_2024-Update
Glyma.06G035700 No alias Homeodomain-like superfamily protein 0.02 Orthogroups_2024-Update
Glyma.07G229800 No alias Homeodomain-like superfamily protein 0.02 Orthogroups_2024-Update
Glyma.09G113000 No alias myb-like HTH transcriptional regulator family protein 0.04 Orthogroups_2024-Update
Glyma.10G281000 No alias Homeodomain-like superfamily protein 0.02 Orthogroups_2024-Update
Glyma.11G183400 No alias Homeodomain-like superfamily protein 0.02 Orthogroups_2024-Update
Glyma.11G213700 No alias Homeodomain-like superfamily protein 0.02 Orthogroups_2024-Update
Glyma.12G089100 No alias Homeodomain-like superfamily protein 0.04 Orthogroups_2024-Update
Glyma.16G152200 No alias Homeodomain-like superfamily protein 0.02 Orthogroups_2024-Update
HORVU1Hr1G068930.39 No alias GARP subgroup PHL transcription factor 0.03 Orthogroups_2024-Update
HORVU5Hr1G047920.4 No alias transcription factor *(CLAUSA) 0.03 Orthogroups_2024-Update
LOC_Os08g33750 No alias myb-like DNA-binding domain containing protein, expressed 0.02 Orthogroups_2024-Update
LOC_Os12g01490 No alias MYB family transcription factor, putative, expressed 0.04 Orthogroups_2024-Update
MA_100658g0020 No alias no hits & (original description: no original description) 0.04 Orthogroups_2024-Update
MA_10251997g0010 No alias no hits & (original description: no original description) 0.03 Orthogroups_2024-Update
MA_10432937g0010 No alias (at5g16560 : 130.0) Encodes a KANADI protein (KAN) that... 0.03 Orthogroups_2024-Update
MA_181986g0010 No alias (at3g04030 : 271.0) Homeodomain-like superfamily... 0.03 Orthogroups_2024-Update
MA_181986g0020 No alias no hits & (original description: no original description) 0.02 Orthogroups_2024-Update
MA_335624g0020 No alias (at4g28610 : 125.0) Similar to phosphate starvation... 0.05 Orthogroups_2024-Update
MA_52379g0010 No alias (at2g40260 : 115.0) Homeodomain-like superfamily... 0.04 Orthogroups_2024-Update
PSME_00007589-RA No alias (at2g40260 : 115.0) Homeodomain-like superfamily... 0.04 Orthogroups_2024-Update
PSME_00038752-RA No alias (at5g16560 : 149.0) Encodes a KANADI protein (KAN) that... 0.04 Orthogroups_2024-Update
Potri.001G314800 No alias Homeodomain-like superfamily protein 0.02 Orthogroups_2024-Update
Potri.010G099600 No alias Homeodomain-like superfamily protein 0.03 Orthogroups_2024-Update
Potri.010G185666 No alias Homeodomain-like superfamily protein 0.04 Orthogroups_2024-Update
Potri.011G023600 No alias Homeodomain-like superfamily protein 0.02 Orthogroups_2024-Update
Potri.019G032700 No alias Homeodomain-like superfamily protein 0.03 Orthogroups_2024-Update
Seita.3G199300.1 No alias GARP subgroup PHL transcription factor 0.04 Orthogroups_2024-Update
Seita.3G373000.1 No alias KANADI-type transcription factor & transcription factor *(CLAUSA) 0.03 Orthogroups_2024-Update
Seita.8G019800.1 No alias transcription factor *(CLAUSA) 0.04 Orthogroups_2024-Update
Seita.9G419000.1 No alias GARP subgroup PHL transcription factor 0.03 Orthogroups_2024-Update
Solyc06g066180 No alias Myb family transcription factor family protein (AHRD... 0.02 Orthogroups_2024-Update
Solyc10g076460 No alias MYB-like transcription factor family protein (AHRD V3.3... 0.02 Orthogroups_2024-Update
Sopen08g024980 No alias Myb-like DNA-binding domain 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003779 actin binding IEP Predicted GO
MF GO:0004180 carboxypeptidase activity IEP Predicted GO
MF GO:0004185 serine-type carboxypeptidase activity IEP Predicted GO
MF GO:0005506 iron ion binding IEP Predicted GO
MF GO:0008236 serine-type peptidase activity IEP Predicted GO
MF GO:0008289 lipid binding IEP Predicted GO
BP GO:0015969 guanosine tetraphosphate metabolic process IEP Predicted GO
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Predicted GO
MF GO:0017171 serine hydrolase activity IEP Predicted GO
MF GO:0020037 heme binding IEP Predicted GO
BP GO:0033865 nucleoside bisphosphate metabolic process IEP Predicted GO
BP GO:0033875 ribonucleoside bisphosphate metabolic process IEP Predicted GO
BP GO:0034032 purine nucleoside bisphosphate metabolic process IEP Predicted GO
BP GO:0034035 purine ribonucleoside bisphosphate metabolic process IEP Predicted GO
MF GO:0043169 cation binding IEP Predicted GO
MF GO:0046872 metal ion binding IEP Predicted GO
MF GO:0046906 tetrapyrrole binding IEP Predicted GO
MF GO:0046914 transition metal ion binding IEP Predicted GO
MF GO:0048037 cofactor binding IEP Predicted GO
MF GO:0070008 serine-type exopeptidase activity IEP Predicted GO
InterPro domains Description Start Stop
IPR025756 Myb_CC_LHEQLE 129 175
IPR001005 SANT/Myb 34 82
No external refs found!