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  5. PSME_00003460-RA

PSME_00003460-RA


Description : (at3g53960 : 557.0) Major facilitator superfamily protein; FUNCTIONS IN: transporter activity; INVOLVED IN: oligopeptide transport; LOCATED IN: plasma membrane, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: PTR2 family proton/oligopeptide symporter, conserved site (InterPro:IPR018456), Oligopeptide transporter (InterPro:IPR000109), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: Major facilitator superfamily protein (TAIR:AT2G37900.1); Has 6025 Blast hits to 5886 proteins in 1158 species: Archae - 0; Bacteria - 2442; Metazoa - 501; Fungi - 426; Plants - 2213; Viruses - 0; Other Eukaryotes - 443 (source: NCBI BLink). & (reliability: 1054.0) & (original description: no original description)


Gene families : OG_42_0000015 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000015_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00003460-RA
Cluster HCCA clusters: Cluster_10

Target Alias Description ECC score Gene Family Method Actions
411211 No alias Major facilitator superfamily protein 0.04 Orthogroups_2024-Update
415640 No alias peptide transporter 5 0.03 Orthogroups_2024-Update
84173 No alias peptide transporter 1 0.02 Orthogroups_2024-Update
A4A49_21916 No alias protein nrt1 ptr family 6.4 0.03 Orthogroups_2024-Update
A4A49_37441 No alias protein nrt1 ptr family 6.3 0.02 Orthogroups_2024-Update
At1g22570 No alias Protein NRT1/ PTR FAMILY 5.15... 0.03 Orthogroups_2024-Update
At1g62200 No alias Major facilitator superfamily protein [Source:TAIR;Acc:AT1G62200] 0.03 Orthogroups_2024-Update
At5g01180 No alias Protein NRT1/ PTR FAMILY 8.2... 0.03 Orthogroups_2024-Update
Brara.G01280.1 No alias anion transporter *(NRT1/PTR) 0.03 Orthogroups_2024-Update
Brara.I02628.1 No alias anion transporter *(NRT1/PTR) 0.04 Orthogroups_2024-Update
Brara.I05137.1 No alias nitrate transceptor *(NRT1.1) & anion transporter *(NRT1/PTR) 0.03 Orthogroups_2024-Update
Glyma.02G003400 No alias peptide transporter 3 0.03 Orthogroups_2024-Update
Glyma.06G145200 No alias Major facilitator superfamily protein 0.02 Orthogroups_2024-Update
Glyma.11G031500 No alias nitrate transporter 1.1 0.02 Orthogroups_2024-Update
Glyma.11G224233 No alias Major facilitator superfamily protein 0.04 Orthogroups_2024-Update
Glyma.11G224400 No alias Major facilitator superfamily protein 0.03 Orthogroups_2024-Update
Glyma.11G235200 No alias Major facilitator superfamily protein 0.03 Orthogroups_2024-Update
Glyma.18G021700 No alias Major facilitator superfamily protein 0.03 Orthogroups_2024-Update
Kfl00057_0100 kfl00057_0100_v1.... (at5g01180 : 590.0) Encodes a dipeptide transporter... 0.02 Orthogroups_2024-Update
LOC_Os03g51050 No alias peptide transporter PTR2, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os03g60850 No alias peptide transporter PTR2, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os06g49220 No alias peptide transporter, putative, expressed 0.02 Orthogroups_2024-Update
MA_10263488g0010 No alias (at5g46040 : 606.0) Major facilitator superfamily... 0.04 Orthogroups_2024-Update
MA_10436042g0010 No alias (at3g54140 : 356.0) Encodes a di- and tri-peptide... 0.03 Orthogroups_2024-Update
MA_927631g0010 No alias (at5g46050 : 227.0) Encodes a di- and tri-peptide... 0.04 Orthogroups_2024-Update
MA_93406g0010 No alias (at2g26690 : 573.0) Major facilitator superfamily... 0.03 Orthogroups_2024-Update
PSME_00017179-RA No alias (at3g54140 : 790.0) Encodes a di- and tri-peptide... 0.05 Orthogroups_2024-Update
PSME_00017195-RA No alias (at3g54140 : 821.0) Encodes a di- and tri-peptide... 0.04 Orthogroups_2024-Update
PSME_00030783-RA No alias (at3g53960 : 552.0) Major facilitator superfamily... 0.04 Orthogroups_2024-Update
PSME_00045306-RA No alias (at2g37900 : 541.0) Major facilitator superfamily... 0.04 Orthogroups_2024-Update
PSME_00048093-RA No alias (at5g46040 : 575.0) Major facilitator superfamily... 0.04 Orthogroups_2024-Update
Potri.008G061100 No alias Major facilitator superfamily protein 0.03 Orthogroups_2024-Update
Potri.016G103500 No alias Major facilitator superfamily protein 0.04 Orthogroups_2024-Update
Potri.019G055800 No alias Major facilitator superfamily protein 0.03 Orthogroups_2024-Update
Pp1s113_26V6 No alias contains ESTs... 0.02 Orthogroups_2024-Update
Pp1s114_7V6 No alias peptide transporter 0.02 Orthogroups_2024-Update
Seita.7G221900.1 No alias anion transporter *(NRT1/PTR) 0.03 Orthogroups_2024-Update
Solyc10g084950 No alias Major facilitator superfamily protein (AHRD V3.3 *** AT2G37900.1) 0.02 Orthogroups_2024-Update
Solyc12g042300 No alias Peptide transporter (AHRD V3.3 *** W9SG60_9ROSA) 0.02 Orthogroups_2024-Update
Sopen07g004440 No alias POT family 0.03 Orthogroups_2024-Update
Sopen08g003380 No alias POT family 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA InterProScan predictions
MF GO:0022857 transmembrane transporter activity IEA InterProScan predictions
BP GO:0055085 transmembrane transport IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEP Predicted GO
MF GO:0003824 catalytic activity IEP Predicted GO
MF GO:0003905 alkylbase DNA N-glycosylase activity IEP Predicted GO
MF GO:0005506 iron ion binding IEP Predicted GO
BP GO:0006073 cellular glucan metabolic process IEP Predicted GO
BP GO:0006284 base-excision repair IEP Predicted GO
BP GO:0006721 terpenoid metabolic process IEP Predicted GO
MF GO:0008661 1-deoxy-D-xylulose-5-phosphate synthase activity IEP Predicted GO
MF GO:0008725 DNA-3-methyladenine glycosylase activity IEP Predicted GO
MF GO:0010333 terpene synthase activity IEP Predicted GO
BP GO:0016114 terpenoid biosynthetic process IEP Predicted GO
MF GO:0016491 oxidoreductase activity IEP Predicted GO
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Predicted GO
MF GO:0016744 transferase activity, transferring aldehyde or ketonic groups IEP Predicted GO
MF GO:0016746 transferase activity, transferring acyl groups IEP Predicted GO
MF GO:0016747 transferase activity, transferring acyl groups other than amino-acyl groups IEP Predicted GO
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP Predicted GO
MF GO:0016799 hydrolase activity, hydrolyzing N-glycosyl compounds IEP Predicted GO
MF GO:0016829 lyase activity IEP Predicted GO
MF GO:0016835 carbon-oxygen lyase activity IEP Predicted GO
MF GO:0016838 carbon-oxygen lyase activity, acting on phosphates IEP Predicted GO
MF GO:0019104 DNA N-glycosylase activity IEP Predicted GO
MF GO:0020037 heme binding IEP Predicted GO
MF GO:0043167 ion binding IEP Predicted GO
MF GO:0043169 cation binding IEP Predicted GO
MF GO:0043733 DNA-3-methylbase glycosylase activity IEP Predicted GO
BP GO:0044042 glucan metabolic process IEP Predicted GO
BP GO:0044264 cellular polysaccharide metabolic process IEP Predicted GO
MF GO:0046872 metal ion binding IEP Predicted GO
MF GO:0046906 tetrapyrrole binding IEP Predicted GO
MF GO:0046914 transition metal ion binding IEP Predicted GO
MF GO:0048037 cofactor binding IEP Predicted GO
BP GO:0055114 oxidation-reduction process IEP Predicted GO
InterPro domains Description Start Stop
IPR000109 POT_fam 118 561
No external refs found!