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  5. PSME_00003496-RA

PSME_00003496-RA


Description : (at5g13200 : 133.0) GRAM domain family protein; CONTAINS InterPro DOMAIN/s: GRAM (InterPro:IPR004182); BEST Arabidopsis thaliana protein match is: GRAM domain family protein (TAIR:AT2G22475.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 266.0) & (original description: no original description)


Gene families : OG_42_0000247 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000247_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00003496-RA
Cluster HCCA clusters: Cluster_90

Target Alias Description ECC score Gene Family Method Actions
A4A49_05972 No alias gem-like protein 1 0.03 Orthogroups_2024-Update
At5g08350 No alias GEM-like protein 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9FTA0] 0.04 Orthogroups_2024-Update
Bradi1g72060 No alias FH interacting protein 1 0.04 Orthogroups_2024-Update
Bradi4g32570 No alias GRAM domain family protein 0.02 Orthogroups_2024-Update
Bradi5g16300 No alias GRAM domain-containing protein / ABA-responsive protein-related 0.03 Orthogroups_2024-Update
Bradi5g16310 No alias GRAM domain-containing protein / ABA-responsive protein-related 0.02 Orthogroups_2024-Update
Brara.B03719.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Brara.C00346.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Brara.F02577.1 No alias Unknown function 0.02 Orthogroups_2024-Update
GRMZM2G009326 No alias GRAM domain family protein 0.04 Orthogroups_2024-Update
Glyma.08G281400 No alias GRAM domain family protein 0.04 Orthogroups_2024-Update
Glyma.20G011200 No alias GRAM domain-containing protein / ABA-responsive protein-related 0.03 Orthogroups_2024-Update
Glyma.20G102300 No alias GRAM domain-containing protein / ABA-responsive protein-related 0.04 Orthogroups_2024-Update
HORVU1Hr1G043500.1 No alias Unknown function 0.03 Orthogroups_2024-Update
HORVU2Hr1G090690.1 No alias Unknown function 0.03 Orthogroups_2024-Update
HORVU5Hr1G115100.2 No alias Unknown function 0.03 Orthogroups_2024-Update
LOC_Os02g42440 No alias GEM, putative, expressed 0.03 Orthogroups_2024-Update
MA_10436711g0010 No alias (at1g28200 : 249.0) VirF-interacting protein FIP1; FH... 0.03 Orthogroups_2024-Update
Seita.9G101000.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.001G098700.1 No alias Unknown function 0.06 Orthogroups_2024-Update
Sobic.004G225900.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Solyc07g021540 No alias GRAM domain protein/ABA-responsive-like protein (AHRD... 0.03 Orthogroups_2024-Update
Solyc11g010440 No alias GRAM domain protein/ABA-responsive-like protein (AHRD... 0.05 Orthogroups_2024-Update
Sopen04g004120 No alias GRAM domain 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity IEP Predicted GO
MF GO:0004180 carboxypeptidase activity IEP Predicted GO
MF GO:0004185 serine-type carboxypeptidase activity IEP Predicted GO
MF GO:0005215 transporter activity IEP Predicted GO
BP GO:0006508 proteolysis IEP Predicted GO
BP GO:0006694 steroid biosynthetic process IEP Predicted GO
BP GO:0006810 transport IEP Predicted GO
BP GO:0007275 multicellular organism development IEP Predicted GO
BP GO:0008202 steroid metabolic process IEP Predicted GO
MF GO:0008233 peptidase activity IEP Predicted GO
MF GO:0008236 serine-type peptidase activity IEP Predicted GO
MF GO:0008238 exopeptidase activity IEP Predicted GO
MF GO:0015267 channel activity IEP Predicted GO
CC GO:0016020 membrane IEP Predicted GO
MF GO:0016229 steroid dehydrogenase activity IEP Predicted GO
MF GO:0017171 serine hydrolase activity IEP Predicted GO
MF GO:0022803 passive transmembrane transporter activity IEP Predicted GO
MF GO:0022857 transmembrane transporter activity IEP Predicted GO
BP GO:0032501 multicellular organismal process IEP Predicted GO
BP GO:0032502 developmental process IEP Predicted GO
MF GO:0033764 steroid dehydrogenase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP Predicted GO
BP GO:0048856 anatomical structure development IEP Predicted GO
BP GO:0051179 localization IEP Predicted GO
BP GO:0051234 establishment of localization IEP Predicted GO
BP GO:0055085 transmembrane transport IEP Predicted GO
MF GO:0070008 serine-type exopeptidase activity IEP Predicted GO
MF GO:0070011 peptidase activity, acting on L-amino acid peptides IEP Predicted GO
MF GO:0071949 FAD binding IEP Predicted GO
InterPro domains Description Start Stop
IPR004182 GRAM 31 140
No external refs found!