Description : (at3g14230 : 136.0) encodes a member of the ERF (ethylene response factor) subfamily B-2 of ERF/AP2 transcription factor family (RAP2.2). The protein contains one AP2 domain. There are 5 members in this subfamily including RAP2.2 AND RAP2.12.; related to AP2 2 (RAP2.2); CONTAINS InterPro DOMAIN/s: DNA-binding, integrase-type (InterPro:IPR016177), Pathogenesis-related transcriptional factor/ERF, DNA-binding (InterPro:IPR001471); BEST Arabidopsis thaliana protein match is: related to AP2 12 (TAIR:AT1G53910.2); Has 6242 Blast hits to 5847 proteins in 256 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 6195; Viruses - 4; Other Eukaryotes - 41 (source: NCBI BLink). & (q6k7e6|erf1_orysa : 111.0) Ethylene-responsive transcription factor 1 (Ethylene-responsive element-binding factor 1) (EREBP-1) (OsEREBP1) - Oryza sativa (Rice) & (reliability: 272.0) & (original description: no original description)
Gene families : OG_42_0000000 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | Pseudotsuga release: PSME_00003641-RA | |
Cluster | HCCA clusters: Cluster_201 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
A4A49_16120 | No alias | ethylene-responsive transcription factor erf061 | 0.03 | Orthogroups_2024-Update | |
A4A49_16905 | No alias | ethylene-responsive transcription factor 5 | 0.03 | Orthogroups_2024-Update | |
AC209257.4_FG006 | No alias | Integrase-type DNA-binding superfamily protein | 0.03 | Orthogroups_2024-Update | |
At1g50640 | No alias | Uncharacterized protein At1g50640 (Fragment)... | 0.03 | Orthogroups_2024-Update | |
At3g25890 | No alias | Ethylene-responsive transcription factor ERF119... | 0.02 | Orthogroups_2024-Update | |
At3g57600 | No alias | Dehydration-responsive element-binding protein 2F... | 0.02 | Orthogroups_2024-Update | |
Bradi3g08790 | No alias | Integrase-type DNA-binding superfamily protein | 0.02 | Orthogroups_2024-Update | |
Bradi3g58980 | No alias | Integrase-type DNA-binding superfamily protein | 0.03 | Orthogroups_2024-Update | |
Bradi4g03371 | No alias | related to AP2 11 | 0.03 | Orthogroups_2024-Update | |
Brara.A01769.1 | No alias | transcription factor *(CRF) & subgroup ERF-VI... | 0.02 | Orthogroups_2024-Update | |
Brara.C04525.1 | No alias | subgroup ERF-III transcription factor | 0.02 | Orthogroups_2024-Update | |
Brara.F03559.1 | No alias | subgroup ERF-IX transcription factor | 0.03 | Orthogroups_2024-Update | |
Brara.G03313.1 | No alias | subgroup ERF-II transcription factor *(ERF16/17/18) | 0.03 | Orthogroups_2024-Update | |
Brara.I00546.1 | No alias | cutin and suberin biosynthesis transcription factor... | 0.03 | Orthogroups_2024-Update | |
Brara.J02528.1 | No alias | subgroup ERF-IX transcription factor | 0.03 | Orthogroups_2024-Update | |
Brara.K01077.1 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update | |
GRMZM2G039112 | No alias | related to AP2 11 | 0.03 | Orthogroups_2024-Update | |
GRMZM2G174917 | No alias | DREB and EAR motif protein 3 | 0.03 | Orthogroups_2024-Update | |
GRMZM2G421033 | No alias | DREB and EAR motif protein 3 | 0.03 | Orthogroups_2024-Update | |
Glyma.01G147600 | No alias | Integrase-type DNA-binding superfamily protein | 0.03 | Orthogroups_2024-Update | |
Glyma.14G205600 | No alias | cytokinin response factor 4 | 0.03 | Orthogroups_2024-Update | |
HORVU1Hr1G048870.1 | No alias | subgroup ERF-III transcription factor | 0.02 | Orthogroups_2024-Update | |
HORVU1Hr1G055710.1 | No alias | subgroup ERF-IX transcription factor | 0.02 | Orthogroups_2024-Update | |
HORVU2Hr1G103660.2 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update | |
LOC_Os03g08500 | No alias | AP2 domain containing protein, expressed | 0.03 | Orthogroups_2024-Update | |
Potri.002G124000 | No alias | related to AP2 1 | 0.03 | Orthogroups_2024-Update | |
Potri.010G006800 | No alias | ethylene-responsive element binding protein | 0.02 | Orthogroups_2024-Update | |
Pp1s14_196V6 | No alias | ap2 erf domain-containing transcription factor | 0.02 | Orthogroups_2024-Update | |
Pp1s195_38V6 | No alias | ap2 erf domain-containing transcription factor | 0.04 | Orthogroups_2024-Update | |
Pp1s259_94V6 | No alias | ap2 erf domain-containing transcription factor | 0.02 | Orthogroups_2024-Update | |
Pp1s296_32V6 | No alias | transcriptional factor | 0.02 | Orthogroups_2024-Update | |
Pp1s41_212V6 | No alias | ap2 erf domain-containing transcription factor | 0.02 | Orthogroups_2024-Update | |
Pp1s67_144V6 | No alias | ap2 domain transcription factor | 0.03 | Orthogroups_2024-Update | |
Sobic.002G115400.1 | No alias | Unknown function | 0.04 | Orthogroups_2024-Update | |
Sobic.005G103100.1 | No alias | Unknown function | 0.02 | Orthogroups_2024-Update | |
Solyc02g077840 | No alias | Ethylene-responsive transcription factor, putative (AHRD... | 0.03 | Orthogroups_2024-Update | |
Solyc03g026270 | No alias | CBF | 0.02 | Orthogroups_2024-Update | |
Solyc12g042210 | No alias | Ethylene-responsive transcription factor (AHRD V3.3 ***... | 0.03 | Orthogroups_2024-Update |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003700 | DNA-binding transcription factor activity | IEA | InterProScan predictions |
BP | GO:0006355 | regulation of transcription, DNA-templated | IEA | InterProScan predictions |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
CC | GO:0000145 | exocyst | IEP | Predicted GO |
MF | GO:0004347 | glucose-6-phosphate isomerase activity | IEP | Predicted GO |
MF | GO:0004367 | glycerol-3-phosphate dehydrogenase [NAD+] activity | IEP | Predicted GO |
MF | GO:0004674 | protein serine/threonine kinase activity | IEP | Predicted GO |
BP | GO:0006072 | glycerol-3-phosphate metabolic process | IEP | Predicted GO |
BP | GO:0006094 | gluconeogenesis | IEP | Predicted GO |
BP | GO:0006766 | vitamin metabolic process | IEP | Predicted GO |
BP | GO:0006767 | water-soluble vitamin metabolic process | IEP | Predicted GO |
BP | GO:0006772 | thiamine metabolic process | IEP | Predicted GO |
BP | GO:0006887 | exocytosis | IEP | Predicted GO |
MF | GO:0008134 | transcription factor binding | IEP | Predicted GO |
MF | GO:0009055 | electron transfer activity | IEP | Predicted GO |
BP | GO:0009110 | vitamin biosynthetic process | IEP | Predicted GO |
BP | GO:0009228 | thiamine biosynthetic process | IEP | Predicted GO |
MF | GO:0015035 | protein disulfide oxidoreductase activity | IEP | Predicted GO |
MF | GO:0015036 | disulfide oxidoreductase activity | IEP | Predicted GO |
MF | GO:0015095 | magnesium ion transmembrane transporter activity | IEP | Predicted GO |
BP | GO:0015693 | magnesium ion transport | IEP | Predicted GO |
MF | GO:0016620 | oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor | IEP | Predicted GO |
MF | GO:0016667 | oxidoreductase activity, acting on a sulfur group of donors | IEP | Predicted GO |
MF | GO:0016860 | intramolecular oxidoreductase activity | IEP | Predicted GO |
MF | GO:0016861 | intramolecular oxidoreductase activity, interconverting aldoses and ketoses | IEP | Predicted GO |
MF | GO:0017025 | TBP-class protein binding | IEP | Predicted GO |
BP | GO:0019319 | hexose biosynthetic process | IEP | Predicted GO |
BP | GO:0019637 | organophosphate metabolic process | IEP | Predicted GO |
BP | GO:0019725 | cellular homeostasis | IEP | Predicted GO |
BP | GO:0022613 | ribonucleoprotein complex biogenesis | IEP | Predicted GO |
MF | GO:0031072 | heat shock protein binding | IEP | Predicted GO |
BP | GO:0032940 | secretion by cell | IEP | Predicted GO |
BP | GO:0042254 | ribosome biogenesis | IEP | Predicted GO |
BP | GO:0042364 | water-soluble vitamin biosynthetic process | IEP | Predicted GO |
BP | GO:0042592 | homeostatic process | IEP | Predicted GO |
BP | GO:0042723 | thiamine-containing compound metabolic process | IEP | Predicted GO |
BP | GO:0042724 | thiamine-containing compound biosynthetic process | IEP | Predicted GO |
BP | GO:0044085 | cellular component biogenesis | IEP | Predicted GO |
CC | GO:0044448 | cell cortex part | IEP | Predicted GO |
BP | GO:0045454 | cell redox homeostasis | IEP | Predicted GO |
BP | GO:0046168 | glycerol-3-phosphate catabolic process | IEP | Predicted GO |
BP | GO:0046364 | monosaccharide biosynthetic process | IEP | Predicted GO |
BP | GO:0046434 | organophosphate catabolic process | IEP | Predicted GO |
BP | GO:0046903 | secretion | IEP | Predicted GO |
BP | GO:0052646 | alditol phosphate metabolic process | IEP | Predicted GO |
BP | GO:0065008 | regulation of biological quality | IEP | Predicted GO |
BP | GO:0070838 | divalent metal ion transport | IEP | Predicted GO |
BP | GO:0072511 | divalent inorganic cation transport | IEP | Predicted GO |
BP | GO:0072527 | pyrimidine-containing compound metabolic process | IEP | Predicted GO |
BP | GO:0072528 | pyrimidine-containing compound biosynthetic process | IEP | Predicted GO |
CC | GO:0099023 | tethering complex | IEP | Predicted GO |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR001471 | AP2/ERF_dom | 108 | 157 |
No external refs found! |