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  5. PSME_00004044-RA

PSME_00004044-RA


Description : (at1g77380 : 466.0) Amino acid permease which transports basic amino acids.; amino acid permease 3 (AAP3); CONTAINS InterPro DOMAIN/s: Amino acid transporter, transmembrane (InterPro:IPR013057); BEST Arabidopsis thaliana protein match is: amino acid permease 2 (TAIR:AT5G09220.1); Has 2346 Blast hits to 2332 proteins in 227 species: Archae - 0; Bacteria - 15; Metazoa - 394; Fungi - 322; Plants - 1373; Viruses - 0; Other Eukaryotes - 242 (source: NCBI BLink). & (reliability: 932.0) & (original description: no original description)


Gene families : OG_42_0000170 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000170_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00004044-RA
Cluster HCCA clusters: Cluster_12

Target Alias Description ECC score Gene Family Method Actions
Bradi1g45180 No alias amino acid permease 8 0.02 Orthogroups_2024-Update
Bradi1g57880 No alias amino acid permease 6 0.04 Orthogroups_2024-Update
Brara.I05241.1 No alias amino acid transporter *(AAP) 0.02 Orthogroups_2024-Update
Glyma.04G088200 No alias amino acid permease 6 0.03 Orthogroups_2024-Update
Glyma.18G071800 No alias amino acid permease 7 0.02 Orthogroups_2024-Update
PSME_00018222-RA No alias (at5g09220 : 667.0) member of AAAP family; amino acid... 0.04 Orthogroups_2024-Update
PSME_00018587-RA No alias (at1g77380 : 400.0) Amino acid permease which transports... 0.03 Orthogroups_2024-Update
PSME_00040178-RA No alias (at5g09220 : 616.0) member of AAAP family; amino acid... 0.04 Orthogroups_2024-Update
PSME_00047245-RA No alias (at1g77380 : 338.0) Amino acid permease which transports... 0.05 Orthogroups_2024-Update
Seita.8G065400.1 No alias amino acid transporter *(AAP) 0.02 Orthogroups_2024-Update
Seita.8G065700.1 No alias amino acid transporter *(AAP) 0.03 Orthogroups_2024-Update
Sobic.006G115300.2 No alias amino acid transporter *(AAP) 0.02 Orthogroups_2024-Update
Sobic.010G166800.1 No alias amino acid transporter *(AAP) 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003917 DNA topoisomerase type I activity IEP Predicted GO
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Predicted GO
MF GO:0004888 transmembrane signaling receptor activity IEP Predicted GO
MF GO:0004970 ionotropic glutamate receptor activity IEP Predicted GO
MF GO:0005215 transporter activity IEP Predicted GO
MF GO:0005216 ion channel activity IEP Predicted GO
MF GO:0005230 extracellular ligand-gated ion channel activity IEP Predicted GO
MF GO:0005516 calmodulin binding IEP Predicted GO
BP GO:0005975 carbohydrate metabolic process IEP Predicted GO
MF GO:0008066 glutamate receptor activity IEP Predicted GO
MF GO:0015276 ligand-gated ion channel activity IEP Predicted GO
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Predicted GO
MF GO:0022824 transmitter-gated ion channel activity IEP Predicted GO
MF GO:0022834 ligand-gated channel activity IEP Predicted GO
MF GO:0022835 transmitter-gated channel activity IEP Predicted GO
MF GO:0022836 gated channel activity IEP Predicted GO
MF GO:0022838 substrate-specific channel activity IEP Predicted GO
MF GO:0022839 ion gated channel activity IEP Predicted GO
MF GO:0022857 transmembrane transporter activity IEP Predicted GO
MF GO:0030594 neurotransmitter receptor activity IEP Predicted GO
MF GO:0038023 signaling receptor activity IEP Predicted GO
MF GO:0060089 molecular transducer activity IEP Predicted GO
InterPro domains Description Start Stop
IPR013057 AA_transpt_TM 38 472
No external refs found!