1. Home
  2. Species
  3. Pseudotsuga menziesii
  4. Sequence
  5. PSME_00005076-RA

PSME_00005076-RA


Description : (at5g45820 : 566.0) Encodes a CBL-interacting serine/threonine protein kinase comprised of an N-terminal kinase catalytic domain similar to SNF1/AMPK and a unique C-terminal regulatory domain.; CBL-interacting protein kinase 20 (CIPK20); CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Serine/threonine-protein kinase domain (InterPro:IPR002290), NAF/FISL domain (InterPro:IPR018451), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271), NAF domain (InterPro:IPR004041), CBL-interacting protein kinase (InterPro:IPR020660), Protein kinase, catalytic domain (InterPro:IPR000719), Calcium/calmodulin-dependent protein kinase-like (InterPro:IPR020636); BEST Arabidopsis thaliana protein match is: SOS3-interacting protein 1 (TAIR:AT5G58380.1); Has 132772 Blast hits to 130743 proteins in 4620 species: Archae - 210; Bacteria - 15587; Metazoa - 48907; Fungi - 13398; Plants - 32037; Viruses - 531; Other Eukaryotes - 22102 (source: NCBI BLink). & (q6x4a2|cipk1_orysa : 500.0) CIPK-like protein 1 (EC 2.7.11.1) (OsCK1) - Oryza sativa (Rice) & (reliability: 1132.0) & (original description: no original description)


Gene families : OG_42_0000034 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000034_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00005076-RA
Cluster HCCA clusters: Cluster_223

Target Alias Description ECC score Gene Family Method Actions
A4A49_00460 No alias cbl-interacting serinethreonine-protein kinase 11 0.03 Orthogroups_2024-Update
A4A49_12929 No alias cbl-interacting protein kinase 18 0.04 Orthogroups_2024-Update
A4A49_17418 No alias cbl-interacting serinethreonine-protein kinase 6 0.04 Orthogroups_2024-Update
A4A49_34663 No alias cbl-interacting serinethreonine-protein kinase 25 0.03 Orthogroups_2024-Update
A4A49_36647 No alias cbl-interacting serinethreonine-protein kinase 6 0.03 Orthogroups_2024-Update
At4g18700 No alias CBL-interacting serine/threonine-protein kinase 12... 0.03 Orthogroups_2024-Update
At4g30960 No alias CBL-interacting serine/threonine-protein kinase 6... 0.03 Orthogroups_2024-Update
At5g01820 No alias CBL-interacting serine/threonine-protein kinase 14... 0.02 Orthogroups_2024-Update
At5g58380 No alias CBL-interacting serine/threonine-protein kinase 10... 0.03 Orthogroups_2024-Update
Bradi1g14200 No alias CBL-interacting protein kinase 4 0.03 Orthogroups_2024-Update
Bradi1g38340 No alias CBL-interacting protein kinase 12 0.03 Orthogroups_2024-Update
Bradi1g63080 No alias SOS3-interacting protein 1 0.02 Orthogroups_2024-Update
Brara.A01079.1 No alias SnRK3 SNF1-related protein kinase & CBL-dependent... 0.03 Orthogroups_2024-Update
Brara.A02686.1 No alias SnRK3 SNF1-related protein kinase & CBL-dependent... 0.04 Orthogroups_2024-Update
Brara.B01149.1 No alias SnRK3 SNF1-related protein kinase & CBL-dependent... 0.02 Orthogroups_2024-Update
Brara.C01182.1 No alias SnRK3 SNF1-related protein kinase & CBL-dependent... 0.04 Orthogroups_2024-Update
Brara.D01604.1 No alias SnRK3 SNF1-related protein kinase & CBL-dependent... 0.03 Orthogroups_2024-Update
Brara.D01811.1 No alias SnRK3 SNF1-related protein kinase & CBL-dependent... 0.03 Orthogroups_2024-Update
Brara.D02078.1 No alias SnRK3 SNF1-related protein kinase & CBL-dependent... 0.02 Orthogroups_2024-Update
Brara.F02713.1 No alias SnRK3 SNF1-related protein kinase & CBL-dependent... 0.06 Orthogroups_2024-Update
Brara.J00067.1 No alias SnRK3 SNF1-related protein kinase & CBL-dependent... 0.03 Orthogroups_2024-Update
Brara.K01202.1 No alias CBL-dependent protein kinase *(CIPK) & EC_2.7... 0.04 Orthogroups_2024-Update
Brara.K01630.1 No alias SnRK3 SNF1-related protein kinase & CBL-dependent... 0.04 Orthogroups_2024-Update
GRMZM2G041463 No alias SOS3-interacting protein 1 0.03 Orthogroups_2024-Update
GRMZM2G096115 No alias CBL-interacting protein kinase 12 0.02 Orthogroups_2024-Update
GRMZM2G099002 No alias CBL-interacting protein kinase 1 0.02 Orthogroups_2024-Update
GRMZM2G137569 No alias Protein kinase superfamily protein 0.02 Orthogroups_2024-Update
GRMZM2G166658 No alias SOS3-interacting protein 1 0.02 Orthogroups_2024-Update
GRMZM2G395458 No alias CBL-interacting protein kinase 18 0.02 Orthogroups_2024-Update
GRMZM2G429940 No alias SOS3-interacting protein 3 0.03 Orthogroups_2024-Update
Glyma.02G217300 No alias CBL-interacting protein kinase 8 0.03 Orthogroups_2024-Update
Glyma.06G062100 No alias CBL-interacting protein kinase 25 0.02 Orthogroups_2024-Update
Glyma.07G023500 No alias CBL-interacting protein kinase 25 0.02 Orthogroups_2024-Update
Glyma.07G051000 No alias CBL-interacting protein kinase 9 0.03 Orthogroups_2024-Update
Glyma.09G079400 No alias CBL-interacting protein kinase 1 0.03 Orthogroups_2024-Update
Glyma.09G276600 No alias SOS3-interacting protein 4 0.04 Orthogroups_2024-Update
Glyma.13G119500 No alias CBL-interacting protein kinase 1 0.02 Orthogroups_2024-Update
Glyma.13G370000 No alias CBL-interacting protein kinase 5 0.02 Orthogroups_2024-Update
Glyma.17G074800 No alias SOS3-interacting protein 3 0.06 Orthogroups_2024-Update
Glyma.18G054600 No alias SOS3-interacting protein 4 0.01 Orthogroups_2024-Update
Glyma.18G055000 No alias SOS3-interacting protein 1 0.02 Orthogroups_2024-Update
Glyma.19G111300 No alias SOS3-interacting protein 1 0.04 Orthogroups_2024-Update
HORVU1Hr1G070100.7 No alias SnRK3 SNF1-related protein kinase & CBL-dependent... 0.03 Orthogroups_2024-Update
HORVU2Hr1G060350.5 No alias SnRK3 SNF1-related protein kinase & CBL-dependent... 0.05 Orthogroups_2024-Update
HORVU3Hr1G073100.2 No alias SnRK3 SNF1-related protein kinase & CBL-dependent... 0.03 Orthogroups_2024-Update
HORVU4Hr1G083080.1 No alias SnRK3 SNF1-related protein kinase & CBL-dependent... 0.02 Orthogroups_2024-Update
HORVU5Hr1G065370.1 No alias SnRK3 SNF1-related protein kinase & CBL-dependent... 0.05 Orthogroups_2024-Update
HORVU5Hr1G084670.1 No alias CBL-dependent protein kinase *(CIPK) & EC_2.7... 0.03 Orthogroups_2024-Update
HORVU5Hr1G093660.1 No alias CBL-dependent protein kinase *(CIPK) & EC_2.7... 0.02 Orthogroups_2024-Update
LOC_Os07g48090 No alias CAMK_KIN1/SNF1/Nim1_like.30 - CAMK includes... 0.02 Orthogroups_2024-Update
LOC_Os08g34240 No alias CAMK_KIN1/SNF1/Nim1_like.33 - CAMK includes... 0.04 Orthogroups_2024-Update
LOC_Os09g25100 No alias CAMK_KIN1/SNF1/Nim1_like.35 - CAMK includes... 0.03 Orthogroups_2024-Update
MA_10434336g0010 No alias (at5g45820 : 480.0) Encodes a CBL-interacting... 0.04 Orthogroups_2024-Update
MA_494273g0010 No alias (at5g45820 : 281.0) Encodes a CBL-interacting... 0.05 Orthogroups_2024-Update
PSME_00001890-RA No alias (at5g21326 : 229.0) Ca2+regulated serine-threonine... 0.02 Orthogroups_2024-Update
PSME_00002771-RA No alias (at1g01140 : 404.0) Encodes a CBL-interacting protein... 0.04 Orthogroups_2024-Update
PSME_00024382-RA No alias (q6x4a2|cipk1_orysa : 516.0) CIPK-like protein 1 (EC... 0.04 Orthogroups_2024-Update
PSME_00029799-RA No alias (at5g21326 : 372.0) Ca2+regulated serine-threonine... 0.02 Orthogroups_2024-Update
Potri.006G186200 No alias SOS3-interacting protein 3 0.03 Orthogroups_2024-Update
Potri.013G156000 No alias SOS3-interacting protein 1 0.02 Orthogroups_2024-Update
Potri.016G133500 No alias SOS3-interacting protein 1 0.03 Orthogroups_2024-Update
Potri.016G133900 No alias serine/threonine protein kinase 1 0.03 Orthogroups_2024-Update
Pp1s211_132V6 No alias cbl-interacting serine threonine-protein 0.02 Orthogroups_2024-Update
Seita.2G206200.1 No alias SnRK3 SNF1-related protein kinase & CBL-dependent... 0.04 Orthogroups_2024-Update
Seita.2G431900.1 No alias CBL-dependent protein kinase *(CIPK) & EC_2.7... 0.02 Orthogroups_2024-Update
Seita.2G432000.1 No alias SnRK3 SNF1-related protein kinase & CBL-dependent... 0.02 Orthogroups_2024-Update
Seita.2G439100.1 No alias SnRK3 SNF1-related protein kinase & CBL-dependent... 0.02 Orthogroups_2024-Update
Seita.3G053800.1 No alias SnRK3 SNF1-related protein kinase & CBL-dependent... 0.04 Orthogroups_2024-Update
Seita.3G181100.1 No alias CBL-dependent protein kinase *(CIPK) & EC_2.7... 0.02 Orthogroups_2024-Update
Seita.3G284500.1 No alias CBL-dependent protein kinase *(CIPK) & EC_2.7... 0.02 Orthogroups_2024-Update
Seita.3G380200.1 No alias CBL-dependent protein kinase *(CIPK) & EC_2.7... 0.02 Orthogroups_2024-Update
Seita.5G031200.1 No alias SnRK3 SNF1-related protein kinase & CBL-dependent... 0.02 Orthogroups_2024-Update
Seita.6G163200.1 No alias SnRK3 SNF1-related protein kinase & CBL-dependent... 0.02 Orthogroups_2024-Update
Seita.7G300300.1 No alias SnRK3 SNF1-related protein kinase & CBL-dependent... 0.06 Orthogroups_2024-Update
Seita.8G014400.1 No alias SnRK3 SNF1-related protein kinase & CBL-dependent... 0.03 Orthogroups_2024-Update
Seita.9G162500.1 No alias CBL-dependent protein kinase *(CIPK) & EC_2.7... 0.03 Orthogroups_2024-Update
Seita.9G411700.1 No alias SnRK3 SNF1-related protein kinase & CBL-dependent... 0.02 Orthogroups_2024-Update
Seita.9G557900.1 No alias SnRK3 SNF1-related protein kinase & CBL-dependent... 0.03 Orthogroups_2024-Update
Sobic.001G161200.1 No alias CBL-dependent protein kinase *(CIPK) & EC_2.7... 0.03 Orthogroups_2024-Update
Sobic.002G203000.1 No alias SnRK3 SNF1-related protein kinase & CBL-dependent... 0.03 Orthogroups_2024-Update
Sobic.002G417201.1 No alias EC_2.7 transferase transferring phosphorus-containing group 0.04 Orthogroups_2024-Update
Sobic.002G417300.1 No alias SnRK3 SNF1-related protein kinase & CBL-dependent... 0.02 Orthogroups_2024-Update
Sobic.003G024400.1 No alias SnRK3 SNF1-related protein kinase & CBL-dependent... 0.04 Orthogroups_2024-Update
Sobic.003G302800.1 No alias SnRK3 SNF1-related protein kinase & CBL-dependent... 0.02 Orthogroups_2024-Update
Sobic.005G012000.1 No alias SnRK3 SNF1-related protein kinase & CBL-dependent... 0.04 Orthogroups_2024-Update
Sobic.008G016200.1 No alias SnRK3 SNF1-related protein kinase & CBL-dependent... 0.03 Orthogroups_2024-Update
Solyc02g072540 No alias Non-specific serine/threonine protein kinase (AHRD V3.3... 0.03 Orthogroups_2024-Update
Solyc05g052270 No alias Non-specific serine/threonine protein kinase (AHRD V3.3... 0.03 Orthogroups_2024-Update
Solyc08g067310 No alias Non-specific serine/threonine protein kinase (AHRD V3.3... 0.02 Orthogroups_2024-Update
Solyc09g083090 No alias Non-specific serine/threonine protein kinase (AHRD V3.3... 0.03 Orthogroups_2024-Update
Solyc09g083100 No alias Non-specific serine/threonine protein kinase (AHRD V3.3... 0.04 Orthogroups_2024-Update
Solyc10g085450 No alias Non-specific serine/threonine protein kinase (AHRD V3.3... 0.03 Orthogroups_2024-Update
Sopen01g004360 No alias Protein kinase domain 0.03 Orthogroups_2024-Update
Sopen09g011120 No alias Protein kinase domain 0.02 Orthogroups_2024-Update
evm.model.contig_3557.1 No alias (at1g01140 : 246.0) Encodes a CBL-interacting protein... 0.01 Orthogroups_2024-Update
evm.model.contig_4476.17 No alias (at2g30360 : 248.0) Encodes a SOS2-like protein kinase... 0.01 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0004672 protein kinase activity IEA InterProScan predictions
MF GO:0005524 ATP binding IEA InterProScan predictions
BP GO:0006468 protein phosphorylation IEA InterProScan predictions
BP GO:0007165 signal transduction IEA InterProScan predictions
Toggle parental
Type GO Term Name Evidence Source
MF GO:0001871 pattern binding IEP Predicted GO
MF GO:0003677 DNA binding IEP Predicted GO
MF GO:0003682 chromatin binding IEP Predicted GO
MF GO:0003700 DNA-binding transcription factor activity IEP Predicted GO
MF GO:0004842 ubiquitin-protein transferase activity IEP Predicted GO
BP GO:0006355 regulation of transcription, DNA-templated IEP Predicted GO
BP GO:0009889 regulation of biosynthetic process IEP Predicted GO
BP GO:0010468 regulation of gene expression IEP Predicted GO
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Predicted GO
BP GO:0010629 negative regulation of gene expression IEP Predicted GO
BP GO:0016458 gene silencing IEP Predicted GO
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Predicted GO
BP GO:0019222 regulation of metabolic process IEP Predicted GO
MF GO:0019787 ubiquitin-like protein transferase activity IEP Predicted GO
MF GO:0030246 carbohydrate binding IEP Predicted GO
MF GO:0030247 polysaccharide binding IEP Predicted GO
BP GO:0031047 gene silencing by RNA IEP Predicted GO
BP GO:0031323 regulation of cellular metabolic process IEP Predicted GO
BP GO:0031326 regulation of cellular biosynthetic process IEP Predicted GO
MF GO:0043565 sequence-specific DNA binding IEP Predicted GO
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Predicted GO
BP GO:0051252 regulation of RNA metabolic process IEP Predicted GO
BP GO:0060255 regulation of macromolecule metabolic process IEP Predicted GO
MF GO:0061630 ubiquitin protein ligase activity IEP Predicted GO
MF GO:0061659 ubiquitin-like protein ligase activity IEP Predicted GO
BP GO:0080090 regulation of primary metabolic process IEP Predicted GO
MF GO:0140110 transcription regulator activity IEP Predicted GO
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Predicted GO
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Predicted GO
BP GO:2001141 regulation of RNA biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR004041 NAF_dom 306 363
IPR000719 Prot_kinase_dom 13 267
No external refs found!