PSME_00005149-RA

Description : (q41542|xth_wheat : 400.0) Probable xyloglucan endotransglucosylase/hydrolase precursor (EC 2.4.1.207) - Triticum aestivum (Wheat) & (at5g13870 : 398.0) EXGT-A4, endoxyloglucan transferase,; xyloglucan endotransglucosylase/hydrolase 5 (XTH5); FUNCTIONS IN: hydrolase activity, acting on glycosyl bonds, hydrolase activity, hydrolyzing O-glycosyl compounds, xyloglucan:xyloglucosyl transferase activity; INVOLVED IN: carbohydrate metabolic process, cellular glucan metabolic process; LOCATED IN: endomembrane system, cell wall, apoplast; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Xyloglucan endotransglucosylase/hydrolase (InterPro:IPR016455), Xyloglucan endo-transglycosylase, C-terminal (InterPro:IPR010713), Concanavalin A-like lectin/glucanase (InterPro:IPR008985), Concanavalin A-like lectin/glucanase, subgroup (InterPro:IPR013320), Glycoside hydrolase, family 16 (InterPro:IPR000757), Glycoside hydrolase, family 16, active site (InterPro:IPR008263); BEST Arabidopsis thaliana protein match is: xyloglucan endotransglucosylase/hydrolase 4 (TAIR:AT2G06850.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (reliability: 796.0) & (original description: no original description)

Gene families : OG_42_0000032 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000032_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Pseudotsuga release: PSME_00005149-RA
Cluster	HCCA clusters: Cluster_241

Target	Alias	Description	ECC score	Gene Family Method
At4g30280	No alias	Probable xyloglucan endotransglucosylase/hydrolase...	0.04	Orthogroups_2024-Update
At5g57540	No alias	Putative xyloglucan endotransglucosylase/hydrolase...	0.03	Orthogroups_2024-Update
Brara.B01205.1	No alias	EC_2.4 glycosyltransferase	0.03	Orthogroups_2024-Update
Brara.B01206.1	No alias	EC_2.4 glycosyltransferase	0.03	Orthogroups_2024-Update
Glyma.09G062600	No alias	xyloglucan endotransglycosylase 6	0.03	Orthogroups_2024-Update
Glyma.16G045000	No alias	xyloglucan endotransglucosylase/hydrolase 5	0.03	Orthogroups_2024-Update
HORVU7Hr1G098440.2	No alias	EC_2.4 glycosyltransferase	0.03	Orthogroups_2024-Update
MA_10432086g0010	No alias	(p35694\|bru1_soybn : 353.0) Brassinosteroid-regulated...	0.03	Orthogroups_2024-Update
Mp8g18980.1	No alias	Enzyme classification.EC_2 transferases.EC_2.4...	0.02	Orthogroups_2024-Update
PSME_00000084-RA	No alias	(at2g36870 : 349.0) xyloglucan...	0.06	Orthogroups_2024-Update
Solyc07g052980	No alias	xyloglucan endotransglycosylase/hydrolase 16	0.02	Orthogroups_2024-Update
Solyc07g055990	No alias	Xyloglucan endotransglucosylase/hydrolase 7 (AHRD V1...	0.03	Orthogroups_2024-Update
Sopen01g027910	No alias	Glycosyl hydrolases family 16	0.03	Orthogroups_2024-Update
Sopen09g003140	No alias	Glycosyl hydrolases family 16	0.04	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds	IEA	InterProScan predictions
MF	GO:0005215	transporter activity	None	Extended
MF	GO:0005319	lipid transporter activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005737	cytoplasm	IEA	InterProScan predictions
BP	GO:0005975	carbohydrate metabolic process	IEA	InterProScan predictions
BP	GO:0006810	transport	None	Extended
BP	GO:0006869	lipid transport	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016043	cellular component organization	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016798	hydrolase activity, acting on glycosyl bonds	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
CC	GO:0044424	intracellular part	None	Extended
CC	GO:0044464	cell part	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0061024	membrane organization	None	Extended
BP	GO:0071702	organic substance transport	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0071840	cellular component organization or biogenesis	None	Extended
BP	GO:0120009	intermembrane lipid transfer	IEA	InterProScan predictions
MF	GO:0120013	intermembrane lipid transfer activity	IEA	InterProScan predictions

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Type	GO Term	Name	Evidence	Source
MF	GO:0004427	inorganic diphosphatase activity	IEP	Predicted GO
BP	GO:0006812	cation transport	IEP	Predicted GO
MF	GO:0008270	zinc ion binding	IEP	Predicted GO
MF	GO:0009678	hydrogen-translocating pyrophosphatase activity	IEP	Predicted GO
CC	GO:0016020	membrane	IEP	Predicted GO
MF	GO:0022857	transmembrane transporter activity	IEP	Predicted GO
MF	GO:0030246	carbohydrate binding	IEP	Predicted GO
MF	GO:0046914	transition metal ion binding	IEP	Predicted GO
BP	GO:0055085	transmembrane transport	IEP	Predicted GO
MF	GO:0061630	ubiquitin protein ligase activity	IEP	Predicted GO
MF	GO:0061659	ubiquitin-like protein ligase activity	IEP	Predicted GO
MF	GO:0071949	FAD binding	IEP	Predicted GO
BP	GO:1902600	proton transmembrane transport	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR014830	Glycolipid_transfer_prot_dom	255	315
IPR000757	GH16	30	210

External Links

No external refs found!

PSME_00005149-RA

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation