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  5. PSME_00005256-RA

PSME_00005256-RA


Description : (at5g37820 : 126.0) NOD26-like intrinsic protein 4;2 (NIP4;2); FUNCTIONS IN: water channel activity; INVOLVED IN: transport, transmembrane transport; LOCATED IN: integral to membrane, membrane; EXPRESSED IN: root, flower, cultured cell, leaf; CONTAINS InterPro DOMAIN/s: Major intrinsic protein, conserved site (InterPro:IPR022357), Aquaporin (InterPro:IPR012269), Major intrinsic protein (InterPro:IPR000425); BEST Arabidopsis thaliana protein match is: NOD26-like intrinsic protein 4;1 (TAIR:AT5G37810.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (q6z2t3|lsi1_orysa : 107.0) Silicon transporter LSI1 (Low silicon protein 1) - Oryza sativa (Rice) & (reliability: 252.0) & (original description: no original description)


Gene families : OG_42_0000209 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000209_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00005256-RA
Cluster HCCA clusters: Cluster_169

Target Alias Description ECC score Gene Family Method Actions
A4A49_42011 No alias aquaporin nip1-1 0.02 Orthogroups_2024-Update
At1g80760 No alias Aquaporin NIP6-1 [Source:UniProtKB/Swiss-Prot;Acc:Q9SAI4] 0.03 Orthogroups_2024-Update
Bradi3g08930 No alias NOD26-like intrinsic protein 1;2 0.04 Orthogroups_2024-Update
Brara.G03703.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Brara.H00623.1 No alias Nodulin-26-like intrinsic protein *(NIP) 0.03 Orthogroups_2024-Update
Glyma.08G120200 No alias NOD26-like intrinsic protein 1;2 0.03 Orthogroups_2024-Update
HORVU7Hr1G038220.1 No alias Nodulin-26-like intrinsic protein *(NIP) 0.03 Orthogroups_2024-Update
HORVU7Hr1G038270.1 No alias Nodulin-26-like intrinsic protein *(NIP) 0.04 Orthogroups_2024-Update
MA_10426635g0010 No alias (q6z2t3|lsi1_orysa : 264.0) Silicon transporter LSI1... 0.03 Orthogroups_2024-Update
MA_158806g0010 No alias (at4g18910 : 283.0) Encodes an aquaporin homolog.... 0.03 Orthogroups_2024-Update
MA_60111g0010 No alias (at1g80760 : 264.0) Encodes a protein with boron... 0.04 Orthogroups_2024-Update
PSME_00013963-RA No alias (at4g18910 : 276.0) Encodes an aquaporin homolog.... 0.02 Orthogroups_2024-Update
PSME_00046962-RA No alias (at4g18910 : 250.0) Encodes an aquaporin homolog.... 0.04 Orthogroups_2024-Update
Seita.4G098700.1 No alias Nodulin-26-like intrinsic protein *(NIP) 0.04 Orthogroups_2024-Update
Solyc05g008080 No alias NOD26-like intrinsic protein 4.2 0.02 Orthogroups_2024-Update
Solyc08g013730 No alias NOD26-like intrinsic protein5.1 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0015267 channel activity IEA InterProScan predictions
CC GO:0016020 membrane IEA InterProScan predictions
BP GO:0055085 transmembrane transport IEA InterProScan predictions
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Type GO Term Name Evidence Source
CC GO:0000159 protein phosphatase type 2A complex IEP Predicted GO
BP GO:0000160 phosphorelay signal transduction system IEP Predicted GO
CC GO:0000786 nucleosome IEP Predicted GO
MF GO:0003860 3-hydroxyisobutyryl-CoA hydrolase activity IEP Predicted GO
BP GO:0007165 signal transduction IEP Predicted GO
CC GO:0008287 protein serine/threonine phosphatase complex IEP Predicted GO
MF GO:0016289 CoA hydrolase activity IEP Predicted GO
MF GO:0016790 thiolester hydrolase activity IEP Predicted GO
MF GO:0019208 phosphatase regulator activity IEP Predicted GO
MF GO:0019888 protein phosphatase regulator activity IEP Predicted GO
CC GO:0032991 protein-containing complex IEP Predicted GO
CC GO:0032993 protein-DNA complex IEP Predicted GO
BP GO:0035556 intracellular signal transduction IEP Predicted GO
CC GO:0044422 organelle part IEP Predicted GO
CC GO:0044427 chromosomal part IEP Predicted GO
CC GO:0044446 intracellular organelle part IEP Predicted GO
CC GO:0044815 DNA packaging complex IEP Predicted GO
CC GO:1903293 phosphatase complex IEP Predicted GO
InterPro domains Description Start Stop
IPR000425 MIP 52 131
IPR000425 MIP 135 197
No external refs found!