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  5. PSME_00005503-RA

PSME_00005503-RA


Description : (at1g76690 : 528.0) Encodes one of the closely related 12-oxophytodienoic acid reductases. This enzyme is not expected to participate in jasmonic acid biosynthesis because during in vitro assays, it shows very little activity with the naturally occurring OPDA isomer. Shows activity towards 2,4,6-trinitrotoluene. Expressed predominately in root. Predicted to be a cytosolic protein.; 12-oxophytodienoate reductase 2 (OPR2); CONTAINS InterPro DOMAIN/s: Aldolase-type TIM barrel (InterPro:IPR013785), NADH:flavin oxidoreductase/NADH oxidase, N-terminal (InterPro:IPR001155); BEST Arabidopsis thaliana protein match is: 12-oxophytodienoate reductase 1 (TAIR:AT1G76680.1); Has 13197 Blast hits to 13176 proteins in 2056 species: Archae - 127; Bacteria - 9811; Metazoa - 29; Fungi - 865; Plants - 452; Viruses - 0; Other Eukaryotes - 1913 (source: NCBI BLink). & (reliability: 1056.0) & (original description: no original description)


Gene families : OG_42_0000346 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000346_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00005503-RA
Cluster HCCA clusters: Cluster_12

Target Alias Description ECC score Gene Family Method Actions
111662 No alias oxophytodienoate-reductase 3 0.04 Orthogroups_2024-Update
Bradi5g00810 No alias 12-oxophytodienoate reductase 1 0.02 Orthogroups_2024-Update
LOC_Os06g11210 No alias 12-oxophytodienoate reductase, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os08g35740 No alias 12-oxophytodienoate reductase, putative, expressed 0.02 Orthogroups_2024-Update
PSME_00005499-RA No alias (at1g76680 : 507.0) Encodes a member of an alpha/beta... 0.04 Orthogroups_2024-Update
Potri.018G065600 No alias oxophytodienoate-reductase 3 0.03 Orthogroups_2024-Update
Pp1s62_139V6 No alias 12-oxophytodienoate reductase 0.03 Orthogroups_2024-Update
Solyc01g103390 No alias 12-oxophytodienoate reductase 2 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0010181 FMN binding IEA InterProScan predictions
MF GO:0016491 oxidoreductase activity IEA InterProScan predictions
BP GO:0055114 oxidation-reduction process IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0004347 glucose-6-phosphate isomerase activity IEP Predicted GO
MF GO:0005506 iron ion binding IEP Predicted GO
BP GO:0005996 monosaccharide metabolic process IEP Predicted GO
BP GO:0006006 glucose metabolic process IEP Predicted GO
BP GO:0006508 proteolysis IEP Predicted GO
BP GO:0006807 nitrogen compound metabolic process IEP Predicted GO
MF GO:0008519 ammonium transmembrane transporter activity IEP Predicted GO
BP GO:0010629 negative regulation of gene expression IEP Predicted GO
BP GO:0015696 ammonium transport IEP Predicted GO
BP GO:0016458 gene silencing IEP Predicted GO
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP Predicted GO
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP Predicted GO
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Predicted GO
BP GO:0019318 hexose metabolic process IEP Predicted GO
BP GO:0031047 gene silencing by RNA IEP Predicted GO
MF GO:0046914 transition metal ion binding IEP Predicted GO
MF GO:0050661 NADP binding IEP Predicted GO
InterPro domains Description Start Stop
IPR001155 OxRdtase_FMN_N 53 388
No external refs found!