Description : (at4g30950 : 585.0) Chloroplastic enzyme responsible for the synthesis of 16:2 and 18:2 fatty acids from galactolipids, sulpholipids and phosphatidylglycerol. Uses ferredoxin as electron donor. Gene mutation resulted in reduced level of unsaturated fatty acids leading to susceptibility to photoinhibition.; fatty acid desaturase 6 (FAD6); FUNCTIONS IN: omega-6 fatty acid desaturase activity; INVOLVED IN: photoinhibition, fatty acid biosynthetic process; LOCATED IN: chloroplast, chloroplast envelope; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Fatty acid desaturase, type 1 (InterPro:IPR005804); BEST Arabidopsis thaliana protein match is: fatty acid desaturase 8 (TAIR:AT5G05580.1); Has 3227 Blast hits to 3218 proteins in 733 species: Archae - 0; Bacteria - 1371; Metazoa - 67; Fungi - 380; Plants - 896; Viruses - 0; Other Eukaryotes - 513 (source: NCBI BLink). & (p48627|fad6c_brana : 585.0) Omega-6 fatty acid desaturase, chloroplast precursor (EC 1.14.19.-) - Brassica napus (Rape) & (reliability: 1170.0) & (original description: no original description)
Gene families : OG_42_0005908 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0005908_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | Pseudotsuga release: PSME_00005693-RA | |
Cluster | HCCA clusters: Cluster_206 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
At4g30950 | No alias | SFD4 [Source:UniProtKB/TrEMBL;Acc:A0A178V0M7] | 0.03 | Orthogroups_2024-Update |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0006629 | lipid metabolic process | IEA | InterProScan predictions |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003852 | 2-isopropylmalate synthase activity | IEP | Predicted GO |
MF | GO:0003919 | FMN adenylyltransferase activity | IEP | Predicted GO |
MF | GO:0004345 | glucose-6-phosphate dehydrogenase activity | IEP | Predicted GO |
MF | GO:0004853 | uroporphyrinogen decarboxylase activity | IEP | Predicted GO |
BP | GO:0006551 | leucine metabolic process | IEP | Predicted GO |
BP | GO:0006766 | vitamin metabolic process | IEP | Predicted GO |
BP | GO:0006767 | water-soluble vitamin metabolic process | IEP | Predicted GO |
BP | GO:0006771 | riboflavin metabolic process | IEP | Predicted GO |
BP | GO:0006778 | porphyrin-containing compound metabolic process | IEP | Predicted GO |
BP | GO:0006779 | porphyrin-containing compound biosynthetic process | IEP | Predicted GO |
BP | GO:0008033 | tRNA processing | IEP | Predicted GO |
BP | GO:0009081 | branched-chain amino acid metabolic process | IEP | Predicted GO |
BP | GO:0009082 | branched-chain amino acid biosynthetic process | IEP | Predicted GO |
BP | GO:0009098 | leucine biosynthetic process | IEP | Predicted GO |
BP | GO:0009110 | vitamin biosynthetic process | IEP | Predicted GO |
BP | GO:0009231 | riboflavin biosynthetic process | IEP | Predicted GO |
MF | GO:0009496 | plastoquinol--plastocyanin reductase activity | IEP | Predicted GO |
CC | GO:0009507 | chloroplast | IEP | Predicted GO |
CC | GO:0009536 | plastid | IEP | Predicted GO |
MF | GO:0016307 | phosphatidylinositol phosphate kinase activity | IEP | Predicted GO |
MF | GO:0016679 | oxidoreductase activity, acting on diphenols and related substances as donors | IEP | Predicted GO |
MF | GO:0016853 | isomerase activity | IEP | Predicted GO |
BP | GO:0032259 | methylation | IEP | Predicted GO |
BP | GO:0033013 | tetrapyrrole metabolic process | IEP | Predicted GO |
BP | GO:0033014 | tetrapyrrole biosynthetic process | IEP | Predicted GO |
CC | GO:0034357 | photosynthetic membrane | IEP | Predicted GO |
BP | GO:0042364 | water-soluble vitamin biosynthetic process | IEP | Predicted GO |
CC | GO:0042651 | thylakoid membrane | IEP | Predicted GO |
BP | GO:0042726 | flavin-containing compound metabolic process | IEP | Predicted GO |
BP | GO:0042727 | flavin-containing compound biosynthetic process | IEP | Predicted GO |
MF | GO:0046912 | transferase activity, transferring acyl groups, acyl groups converted into alkyl on transfer | IEP | Predicted GO |
MF | GO:0051537 | 2 iron, 2 sulfur cluster binding | IEP | Predicted GO |
MF | GO:0052880 | oxidoreductase activity, acting on diphenols and related substances as donors, with copper protein as acceptor | IEP | Predicted GO |
MF | GO:0070566 | adenylyltransferase activity | IEP | Predicted GO |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR005804 | FA_desaturase_dom | 114 | 361 |
No external refs found! |