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  5. PSME_00006294-RA

PSME_00006294-RA


Description : (at3g03990 : 291.0) alpha/beta-Hydrolases superfamily protein; CONTAINS InterPro DOMAIN/s: Alpha/beta hydrolase fold-1 (InterPro:IPR000073); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT4G37470.1); Has 7052 Blast hits to 7050 proteins in 1427 species: Archae - 69; Bacteria - 5615; Metazoa - 94; Fungi - 57; Plants - 279; Viruses - 0; Other Eukaryotes - 938 (source: NCBI BLink). & (reliability: 582.0) & (original description: no original description)


Gene families : OG_42_0000569 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000569_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00006294-RA
Cluster HCCA clusters: Cluster_12

Target Alias Description ECC score Gene Family Method Actions
A4A49_21279 No alias putative esterase d14l 0.02 Orthogroups_2024-Update
Brara.A02582.1 No alias strigolactone signal transducer *(DLK2) 0.03 Orthogroups_2024-Update
PSME_00020814-RA No alias (at3g03990 : 305.0) alpha/beta-Hydrolases superfamily... 0.03 Orthogroups_2024-Update
PSME_00029144-RA No alias (at3g03990 : 341.0) alpha/beta-Hydrolases superfamily... 0.03 Orthogroups_2024-Update
PSME_00055815-RA No alias (at3g03990 : 338.0) alpha/beta-Hydrolases superfamily... 0.05 Orthogroups_2024-Update
Pp1s113_14V6 No alias sigma factor sigb regulation protein 0.02 Orthogroups_2024-Update
Solyc02g092760 No alias Sigma factor sigb regulation protein rsbq, putative... 0.02 Orthogroups_2024-Update
Sopen02g014870 No alias Alpha/beta hydrolase family 0.02 Orthogroups_2024-Update
Sopen02g037310 No alias Alpha/beta hydrolase family 0.04 Orthogroups_2024-Update
Sopen05g015210 No alias Alpha/beta hydrolase family 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000394 RNA splicing, via endonucleolytic cleavage and ligation IEP Predicted GO
BP GO:0006388 tRNA splicing, via endonucleolytic cleavage and ligation IEP Predicted GO
BP GO:0006778 porphyrin-containing compound metabolic process IEP Predicted GO
BP GO:0006787 porphyrin-containing compound catabolic process IEP Predicted GO
BP GO:0008033 tRNA processing IEP Predicted GO
MF GO:0008519 ammonium transmembrane transporter activity IEP Predicted GO
BP GO:0015696 ammonium transport IEP Predicted GO
BP GO:0015994 chlorophyll metabolic process IEP Predicted GO
BP GO:0015996 chlorophyll catabolic process IEP Predicted GO
BP GO:0033013 tetrapyrrole metabolic process IEP Predicted GO
BP GO:0033015 tetrapyrrole catabolic process IEP Predicted GO
BP GO:0042440 pigment metabolic process IEP Predicted GO
BP GO:0046149 pigment catabolic process IEP Predicted GO
MF GO:0047746 chlorophyllase activity IEP Predicted GO
BP GO:0051187 cofactor catabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR000073 AB_hydrolase_1 24 158
No external refs found!