1. Home
  2. Species
  3. Pseudotsuga menziesii
  4. Sequence
  5. PSME_00006631-RA

PSME_00006631-RA


Description : (at5g57330 : 395.0) Galactose mutarotase-like superfamily protein; FUNCTIONS IN: isomerase activity, carbohydrate binding, aldose 1-epimerase activity, catalytic activity; INVOLVED IN: galactose metabolic process, carbohydrate metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase-type carbohydrate-binding (InterPro:IPR011013), Aldose 1-epimerase (InterPro:IPR008183), Glycoside hydrolase-type carbohydrate-binding, subgroup (InterPro:IPR014718); BEST Arabidopsis thaliana protein match is: Galactose mutarotase-like superfamily protein (TAIR:AT3G61610.1); Has 1923 Blast hits to 1920 proteins in 763 species: Archae - 0; Bacteria - 1269; Metazoa - 39; Fungi - 135; Plants - 272; Viruses - 0; Other Eukaryotes - 208 (source: NCBI BLink). & (reliability: 790.0) & (original description: no original description)


Gene families : OG_42_0000737 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000737_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00006631-RA
Cluster HCCA clusters: Cluster_213

Target Alias Description ECC score Gene Family Method Actions
At4g23730 No alias Galactose mutarotase-like superfamily protein... 0.02 Orthogroups_2024-Update
Brara.A01382.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Brara.C00629.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Brara.G01931.1 No alias Unknown function 0.03 Orthogroups_2024-Update
GRMZM2G003354 No alias Galactose mutarotase-like superfamily protein 0.02 Orthogroups_2024-Update
GRMZM2G039588 No alias Galactose mutarotase-like superfamily protein 0.02 Orthogroups_2024-Update
Glyma.01G223900 No alias Galactose mutarotase-like superfamily protein 0.03 Orthogroups_2024-Update
Glyma.19G057200 No alias aldose 1-epimerase family protein 0.03 Orthogroups_2024-Update
LOC_Os04g51390 No alias aldose 1-epimerase, putative, expressed 0.02 Orthogroups_2024-Update
PSME_00028529-RA No alias (at5g14500 : 211.0) aldose 1-epimerase family protein;... 0.04 Orthogroups_2024-Update
Solyc01g095470 No alias Aldose 1-epimerase, putative (AHRD V3.3 *** B9RE17_RICCO) 0.02 Orthogroups_2024-Update
Solyc02g067860 No alias aldose 1-epimerase family protein (AHRD V3.3 *** AT5G14500.2) 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
BP GO:0005975 carbohydrate metabolic process IEA InterProScan predictions
MF GO:0016853 isomerase activity IEA InterProScan predictions
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP Predicted GO
MF GO:0003830 beta-1,4-mannosylglycoprotein 4-beta-N-acetylglucosaminyltransferase activity IEP Predicted GO
MF GO:0005506 iron ion binding IEP Predicted GO
BP GO:0006355 regulation of transcription, DNA-templated IEP Predicted GO
BP GO:0006487 protein N-linked glycosylation IEP Predicted GO
BP GO:0007165 signal transduction IEP Predicted GO
MF GO:0008375 acetylglucosaminyltransferase activity IEP Predicted GO
BP GO:0009889 regulation of biosynthetic process IEP Predicted GO
BP GO:0010468 regulation of gene expression IEP Predicted GO
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Predicted GO
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Predicted GO
MF GO:0016780 phosphotransferase activity, for other substituted phosphate groups IEP Predicted GO
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Predicted GO
BP GO:0019222 regulation of metabolic process IEP Predicted GO
MF GO:0020037 heme binding IEP Predicted GO
BP GO:0031323 regulation of cellular metabolic process IEP Predicted GO
BP GO:0031326 regulation of cellular biosynthetic process IEP Predicted GO
MF GO:0043169 cation binding IEP Predicted GO
MF GO:0046872 metal ion binding IEP Predicted GO
MF GO:0046906 tetrapyrrole binding IEP Predicted GO
MF GO:0046914 transition metal ion binding IEP Predicted GO
BP GO:0050789 regulation of biological process IEP Predicted GO
BP GO:0050794 regulation of cellular process IEP Predicted GO
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Predicted GO
BP GO:0051252 regulation of RNA metabolic process IEP Predicted GO
BP GO:0060255 regulation of macromolecule metabolic process IEP Predicted GO
MF GO:0061630 ubiquitin protein ligase activity IEP Predicted GO
MF GO:0061659 ubiquitin-like protein ligase activity IEP Predicted GO
BP GO:0065007 biological regulation IEP Predicted GO
BP GO:0080090 regulation of primary metabolic process IEP Predicted GO
MF GO:0140103 catalytic activity, acting on a glycoprotein IEP Predicted GO
MF GO:0140110 transcription regulator activity IEP Predicted GO
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Predicted GO
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Predicted GO
BP GO:2001141 regulation of RNA biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR008183 Aldose_1/G6P_1-epimerase 55 324
No external refs found!