1. Home
  2. Species
  3. Pseudotsuga menziesii
  4. Sequence
  5. PSME_00007045-RA

PSME_00007045-RA


Description : "(at2g46950 : 342.0) member of CYP709B; ""cytochrome P450, family 709, subfamily B, polypeptide 2"" (CYP709B2); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; LOCATED IN: endomembrane system; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, conserved site (InterPro:IPR017972), Cytochrome P450, E-class, group I (InterPro:IPR002401); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 709, subfamily B, polypeptide 3 (TAIR:AT4G27710.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (q05047|c72a1_catro : 293.0) Cytochrome P450 72A1 (EC 1.3.3.9) (CYPLXXII) (Secologanin synthase) (SLS) - Catharanthus roseus (Rosy periwinkle) (Madagascar periwinkle) & (reliability: 684.0) & (original description: no original description)"


Gene families : OG_42_0000028 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000028_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00007045-RA
Cluster HCCA clusters: Cluster_148

Target Alias Description ECC score Gene Family Method Actions
A4A49_21442 No alias cytochrome p450 cyp72a219 0.02 Orthogroups_2024-Update
A4A49_23694 No alias cytochrome p450 cyp72a219 0.03 Orthogroups_2024-Update
At1g17060 No alias cytochrome p450 72c1 [Source:TAIR;Acc:AT1G17060] 0.03 Orthogroups_2024-Update
At4g27710 No alias Cytochrome P450 709B3 [Source:UniProtKB/Swiss-Prot;Acc:Q9T093] 0.02 Orthogroups_2024-Update
Bradi1g06030 No alias cytochrome P450, family 72, subfamily A, polypeptide 14 0.03 Orthogroups_2024-Update
Bradi2g04660 No alias Cytochrome P450 superfamily protein 0.02 Orthogroups_2024-Update
Bradi2g44170 No alias cytochrome P450, family 72, subfamily A, polypeptide 14 0.03 Orthogroups_2024-Update
Bradi3g07690 No alias Cytochrome P450 superfamily protein 0.01 Orthogroups_2024-Update
Brara.A03182.1 No alias EC_1.14 oxidoreductase acting on paired donor with... 0.03 Orthogroups_2024-Update
Brara.C03537.1 No alias EC_1.14 oxidoreductase acting on paired donor with... 0.03 Orthogroups_2024-Update
Brara.G03328.1 No alias EC_1.14 oxidoreductase acting on paired donor with... 0.02 Orthogroups_2024-Update
HORVU4Hr1G058340.2 No alias EC_1.14 oxidoreductase acting on paired donor with... 0.02 Orthogroups_2024-Update
MA_3670g0010 No alias (at2g26710 : 467.0) Encodes a member of the cytochrome... 0.03 Orthogroups_2024-Update
MA_8137092g0010 No alias "(at2g46950 : 473.0) member of CYP709B; ""cytochrome... 0.03 Orthogroups_2024-Update
Mp3g03400.1 No alias Cytochrome P450 734A1 OS=Arabidopsis thaliana... 0.02 Orthogroups_2024-Update
Mp6g20540.1 No alias Cytochrome P450 734A1 OS=Arabidopsis thaliana... 0.03 Orthogroups_2024-Update
PSME_00035431-RA No alias "(at2g46950 : 314.0) member of CYP709B; ""cytochrome... 0.03 Orthogroups_2024-Update
Potri.010G139400 No alias Cytochrome P450 superfamily protein 0.03 Orthogroups_2024-Update
Sobic.001G359300.1 No alias EC_1.14 oxidoreductase acting on paired donor with... 0.03 Orthogroups_2024-Update
Sobic.003G227900.1 No alias EC_1.14 oxidoreductase acting on paired donor with... 0.03 Orthogroups_2024-Update
Solyc07g041500 No alias Cytochrome P450, putative (AHRD V3.3 *** A0A061GL91_THECC) 0.02 Orthogroups_2024-Update
Sopen06g021210 No alias Cytochrome P450 0.03 Orthogroups_2024-Update
Sopen07g025710 No alias Cytochrome P450 0.02 Orthogroups_2024-Update
Sopen07g028940 No alias Cytochrome P450 0.04 Orthogroups_2024-Update
evm.model.contig_611.10 No alias "(at2g46960 : 109.0) member of CYP709B; ""cytochrome... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005506 iron ion binding IEA InterProScan predictions
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEA InterProScan predictions
MF GO:0020037 heme binding IEA InterProScan predictions
BP GO:0055114 oxidation-reduction process IEA InterProScan predictions
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003905 alkylbase DNA N-glycosylase activity IEP Predicted GO
MF GO:0004089 carbonate dehydratase activity IEP Predicted GO
MF GO:0004126 cytidine deaminase activity IEP Predicted GO
MF GO:0004417 hydroxyethylthiazole kinase activity IEP Predicted GO
MF GO:0005319 lipid transporter activity IEP Predicted GO
CC GO:0005779 integral component of peroxisomal membrane IEP Predicted GO
BP GO:0006213 pyrimidine nucleoside metabolic process IEP Predicted GO
BP GO:0006216 cytidine catabolic process IEP Predicted GO
BP GO:0006284 base-excision repair IEP Predicted GO
BP GO:0006766 vitamin metabolic process IEP Predicted GO
BP GO:0006767 water-soluble vitamin metabolic process IEP Predicted GO
BP GO:0006772 thiamine metabolic process IEP Predicted GO
BP GO:0006869 lipid transport IEP Predicted GO
MF GO:0008289 lipid binding IEP Predicted GO
MF GO:0008725 DNA-3-methyladenine glycosylase activity IEP Predicted GO
BP GO:0009110 vitamin biosynthetic process IEP Predicted GO
BP GO:0009164 nucleoside catabolic process IEP Predicted GO
BP GO:0009228 thiamine biosynthetic process IEP Predicted GO
BP GO:0009972 cytidine deamination IEP Predicted GO
BP GO:0016559 peroxisome fission IEP Predicted GO
MF GO:0016799 hydrolase activity, hydrolyzing N-glycosyl compounds IEP Predicted GO
MF GO:0019104 DNA N-glycosylase activity IEP Predicted GO
BP GO:0019725 cellular homeostasis IEP Predicted GO
CC GO:0031231 intrinsic component of peroxisomal membrane IEP Predicted GO
CC GO:0031300 intrinsic component of organelle membrane IEP Predicted GO
CC GO:0031301 integral component of organelle membrane IEP Predicted GO
BP GO:0034656 nucleobase-containing small molecule catabolic process IEP Predicted GO
BP GO:0042364 water-soluble vitamin biosynthetic process IEP Predicted GO
BP GO:0042454 ribonucleoside catabolic process IEP Predicted GO
BP GO:0042592 homeostatic process IEP Predicted GO
BP GO:0042723 thiamine-containing compound metabolic process IEP Predicted GO
BP GO:0042724 thiamine-containing compound biosynthetic process IEP Predicted GO
MF GO:0043733 DNA-3-methylbase glycosylase activity IEP Predicted GO
CC GO:0044438 microbody part IEP Predicted GO
CC GO:0044439 peroxisomal part IEP Predicted GO
BP GO:0045454 cell redox homeostasis IEP Predicted GO
BP GO:0046087 cytidine metabolic process IEP Predicted GO
BP GO:0046131 pyrimidine ribonucleoside metabolic process IEP Predicted GO
BP GO:0046133 pyrimidine ribonucleoside catabolic process IEP Predicted GO
BP GO:0046135 pyrimidine nucleoside catabolic process IEP Predicted GO
BP GO:0048285 organelle fission IEP Predicted GO
BP GO:0061024 membrane organization IEP Predicted GO
BP GO:0072527 pyrimidine-containing compound metabolic process IEP Predicted GO
BP GO:0072528 pyrimidine-containing compound biosynthetic process IEP Predicted GO
BP GO:0072529 pyrimidine-containing compound catabolic process IEP Predicted GO
BP GO:0120009 intermembrane lipid transfer IEP Predicted GO
MF GO:0120013 intermembrane lipid transfer activity IEP Predicted GO
BP GO:1901658 glycosyl compound catabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR001128 Cyt_P450 59 416
No external refs found!