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  5. PSME_00007589-RA

PSME_00007589-RA


Description : (at2g40260 : 115.0) Homeodomain-like superfamily protein; CONTAINS InterPro DOMAIN/s: Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Myb-like DNA-binding domain, SHAQKYF class (InterPro:IPR006447), Homeodomain-related (InterPro:IPR012287); BEST Arabidopsis thaliana protein match is: myb-like HTH transcriptional regulator family protein (TAIR:AT2G38300.1); Has 1902 Blast hits to 1885 proteins in 114 species: Archae - 0; Bacteria - 0; Metazoa - 125; Fungi - 17; Plants - 1623; Viruses - 0; Other Eukaryotes - 137 (source: NCBI BLink). & (reliability: 230.0) & (original description: no original description)


Gene families : OG_42_0000021 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000021_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00007589-RA
Cluster HCCA clusters: Cluster_10

Target Alias Description ECC score Gene Family Method Actions
438638 No alias Homeodomain-like superfamily protein 0.03 Orthogroups_2024-Update
A4A49_09160 No alias transcription repressor kan1 0.03 Orthogroups_2024-Update
A4A49_09886 No alias putative transcription factor kan2 0.03 Orthogroups_2024-Update
At2g02060 No alias Glycosyltransferase [Source:UniProtKB/TrEMBL;Acc:Q7X887] 0.03 Orthogroups_2024-Update
At2g06020 No alias Homeodomain-like superfamily protein... 0.03 Orthogroups_2024-Update
Bradi3g52320 No alias Homeodomain-like superfamily protein 0.03 Orthogroups_2024-Update
Bradi4g29700 No alias Homeodomain-like superfamily protein 0.03 Orthogroups_2024-Update
Brara.B03086.1 No alias transcription factor *(CLAUSA) 0.04 Orthogroups_2024-Update
Glyma.01G009600 No alias Homeodomain-like superfamily protein 0.03 Orthogroups_2024-Update
Glyma.07G153900 No alias myb-like HTH transcriptional regulator family protein 0.02 Orthogroups_2024-Update
Glyma.20G108600 No alias Homeodomain-like superfamily protein 0.03 Orthogroups_2024-Update
HORVU7Hr1G107670.1 No alias transcription factor *(CLAUSA) 0.02 Orthogroups_2024-Update
LOC_Os04g47890 No alias MYB family transcription factor, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os08g33750 No alias myb-like DNA-binding domain containing protein, expressed 0.02 Orthogroups_2024-Update
LOC_Os09g23200 No alias KANADI1, putative, expressed 0.02 Orthogroups_2024-Update
MA_10432937g0010 No alias (at5g16560 : 130.0) Encodes a KANADI protein (KAN) that... 0.03 Orthogroups_2024-Update
PSME_00002495-RA No alias (at1g32240 : 135.0) Encodes a member of the KANADI... 0.06 Orthogroups_2024-Update
PSME_00003323-RA No alias (at3g24120 : 251.0) Homeodomain-like superfamily... 0.04 Orthogroups_2024-Update
PSME_00040944-RA No alias (at3g04030 : 275.0) Homeodomain-like superfamily... 0.03 Orthogroups_2024-Update
PSME_00043647-RA No alias (at3g24120 : 209.0) Homeodomain-like superfamily... 0.04 Orthogroups_2024-Update
Potri.008G071700 No alias Homeodomain-like superfamily protein 0.02 Orthogroups_2024-Update
Potri.019G032700 No alias Homeodomain-like superfamily protein 0.04 Orthogroups_2024-Update
Pp1s137_203V6 No alias No description available 0.02 Orthogroups_2024-Update
Pp1s141_97V6 No alias myb family transcription factor 0.02 Orthogroups_2024-Update
Seita.3G199300.1 No alias GARP subgroup PHL transcription factor 0.02 Orthogroups_2024-Update
Solyc03g006150 No alias LOW QUALITY:MYB-like transcription factor family protein... 0.02 Orthogroups_2024-Update
Sopen02g021600 No alias Myb-like DNA-binding domain 0.03 Orthogroups_2024-Update
Sopen06g003060 No alias MYB-CC type transfactor, LHEQLE motif 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEP Predicted GO
CC GO:0000808 origin recognition complex IEP Predicted GO
MF GO:0003674 molecular_function IEP Predicted GO
MF GO:0003677 DNA binding IEP Predicted GO
MF GO:0003700 DNA-binding transcription factor activity IEP Predicted GO
MF GO:0003824 catalytic activity IEP Predicted GO
MF GO:0005506 iron ion binding IEP Predicted GO
CC GO:0005575 cellular_component IEP Predicted GO
CC GO:0005664 nuclear origin of replication recognition complex IEP Predicted GO
BP GO:0006275 regulation of DNA replication IEP Predicted GO
BP GO:0006720 isoprenoid metabolic process IEP Predicted GO
BP GO:0006721 terpenoid metabolic process IEP Predicted GO
BP GO:0008299 isoprenoid biosynthetic process IEP Predicted GO
MF GO:0008661 1-deoxy-D-xylulose-5-phosphate synthase activity IEP Predicted GO
BP GO:0009889 regulation of biosynthetic process IEP Predicted GO
MF GO:0010333 terpene synthase activity IEP Predicted GO
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Predicted GO
BP GO:0016114 terpenoid biosynthetic process IEP Predicted GO
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Predicted GO
MF GO:0016744 transferase activity, transferring aldehyde or ketonic groups IEP Predicted GO
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP Predicted GO
MF GO:0016829 lyase activity IEP Predicted GO
MF GO:0016835 carbon-oxygen lyase activity IEP Predicted GO
MF GO:0016838 carbon-oxygen lyase activity, acting on phosphates IEP Predicted GO
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Predicted GO
MF GO:0020037 heme binding IEP Predicted GO
BP GO:0031326 regulation of cellular biosynthetic process IEP Predicted GO
MF GO:0043169 cation binding IEP Predicted GO
MF GO:0043565 sequence-specific DNA binding IEP Predicted GO
CC GO:0044454 nuclear chromosome part IEP Predicted GO
MF GO:0046872 metal ion binding IEP Predicted GO
MF GO:0046906 tetrapyrrole binding IEP Predicted GO
MF GO:0046914 transition metal ion binding IEP Predicted GO
MF GO:0048037 cofactor binding IEP Predicted GO
BP GO:0051052 regulation of DNA metabolic process IEP Predicted GO
BP GO:0055114 oxidation-reduction process IEP Predicted GO
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR001005 SANT/Myb 21 71
No external refs found!