PSME_00007824-RA

Description : (at1g09970 : 736.0) RLK7 belongs to a leucine-rich repeat class of receptor-likekinase (LRR-RLKs). It is involved in the control of germination speed and the tolerance to oxidant stress.; LRR XI-23; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation, transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid autophosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Leucine-rich repeat protein kinase family protein (TAIR:AT3G19700.1); Has 205125 Blast hits to 136515 proteins in 4580 species: Archae - 168; Bacteria - 22290; Metazoa - 61642; Fungi - 10712; Plants - 85268; Viruses - 403; Other Eukaryotes - 24642 (source: NCBI BLink). & (p93194|rpk1_iponi : 438.0) Receptor-like protein kinase precursor (EC 2.7.11.1) - Ipomoea nil (Japanese morning glory) (Pharbitis nil) & (reliability: 1472.0) & (original description: no original description)

Gene families : OG_42_0000035 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000035_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Pseudotsuga release: PSME_00007824-RA
Cluster	HCCA clusters: Cluster_28

Target	Alias	Description	ECC score	Gene Family Method
171048	No alias	HAESA-like 1	0.02	Orthogroups_2024-Update
At5g61480	No alias	Leucine-rich repeat receptor-like protein kinase TDR...	0.02	Orthogroups_2024-Update
Bradi3g28380	No alias	Protein kinase family protein with leucine-rich repeat domain	0.03	Orthogroups_2024-Update
Bradi3g34457	No alias	PEP1 receptor 1	0.03	Orthogroups_2024-Update
Bradi3g35137	No alias	HAESA-like 1	0.03	Orthogroups_2024-Update
Bradi4g21836	No alias	Leucine-rich receptor-like protein kinase family protein	0.02	Orthogroups_2024-Update
GRMZM2G136353	No alias	HAESA-like 1	0.02	Orthogroups_2024-Update
Glyma.01G062900	No alias	Leucine-rich repeat receptor-like protein kinase family protein	0.03	Orthogroups_2024-Update
Glyma.03G165800	No alias	Leucine-rich repeat receptor-like protein kinase family protein	0.03	Orthogroups_2024-Update
HORVU2Hr1G020420.2	No alias	LRR-XI protein kinase & IDA/IDL-peptide receptor kinase...	0.03	Orthogroups_2024-Update
HORVU7Hr1G085600.1	No alias	LRR-XI protein kinase & RGF-peptide receptor *(RGFR) &...	0.03	Orthogroups_2024-Update
Kfl00005_0240	kfl00005_0240_v1....	(at1g56130 : 221.0) Leucine-rich repeat transmembrane...	0.03	Orthogroups_2024-Update
Kfl00076_0260	kfl00076_0260_v1....	(at1g11050 : 253.0) Protein kinase superfamily protein;...	0.02	Orthogroups_2024-Update
Kfl00311_0060	kfl00311_0060_v1....	(at3g18810 : 254.0) Protein kinase superfamily protein;...	0.04	Orthogroups_2024-Update
MA_16314g0010	No alias	(at1g28440 : 645.0) HAESA-like 1 (HSL1); FUNCTIONS IN:...	0.03	Orthogroups_2024-Update
MA_9296268g0010	No alias	(at1g28440 : 353.0) HAESA-like 1 (HSL1); FUNCTIONS IN:...	0.02	Orthogroups_2024-Update
PSME_00048386-RA	No alias	(at5g65700 : 218.0) Encodes a CLAVATA1-related receptor...	0.03	Orthogroups_2024-Update
Potri.004G049100	No alias	HAESA-like 1	0.04	Orthogroups_2024-Update
Seita.4G183100.1	No alias	LRR-XV protein kinase & SCREW peptide receptor *(NUT) &...	0.06	Orthogroups_2024-Update
Seita.5G027200.1	No alias	EC_2.7 transferase transferring phosphorus-containing group	0.03	Orthogroups_2024-Update
Seita.5G313300.1	No alias	LRR-XV protein kinase & SCREW peptide receptor *(NUT) &...	0.02	Orthogroups_2024-Update
Sobic.003G291700.1	No alias	LRR-XV protein kinase & SCREW peptide receptor *(NUT) &...	0.02	Orthogroups_2024-Update
Sobic.005G091300.2	No alias	LRR-XI protein kinase & CEP-peptide receptor *(CEPR) &...	0.02	Orthogroups_2024-Update
Solyc02g077630	No alias	Receptor-like protein kinase HSL1 (AHRD V3.3 *** HSL1_ARATH)	0.02	Orthogroups_2024-Update
Solyc08g066270	No alias	kinase family with leucine-rich repeat domain-containing...	0.03	Orthogroups_2024-Update
Sopen11g010570	No alias	Protein kinase domain	0.04	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004672	protein kinase activity	IEA	InterProScan predictions
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	IEA	InterProScan predictions
MF	GO:0005524	ATP binding	IEA	InterProScan predictions
BP	GO:0006464	cellular protein modification process	None	Extended
BP	GO:0006468	protein phosphorylation	IEA	InterProScan predictions
BP	GO:0006793	phosphorus metabolic process	None	Extended
BP	GO:0006796	phosphate-containing compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
MF	GO:0008144	drug binding	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0016301	kinase activity	None	Extended
BP	GO:0016310	phosphorylation	None	Extended
MF	GO:0016740	transferase activity	None	Extended
MF	GO:0016772	transferase activity, transferring phosphorus-containing groups	None	Extended
MF	GO:0016773	phosphotransferase activity, alcohol group as acceptor	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
BP	GO:0036211	protein modification process	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0043412	macromolecule modification	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044267	cellular protein metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:0140096	catalytic activity, acting on a protein	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
MF	GO:0000155	phosphorelay sensor kinase activity	IEP	Predicted GO
BP	GO:0000272	polysaccharide catabolic process	IEP	Predicted GO
MF	GO:0003774	motor activity	IEP	Predicted GO
MF	GO:0003896	DNA primase activity	IEP	Predicted GO
MF	GO:0003899	DNA-directed 5'-3' RNA polymerase activity	IEP	Predicted GO
MF	GO:0004356	glutamate-ammonia ligase activity	IEP	Predicted GO
MF	GO:0004673	protein histidine kinase activity	IEP	Predicted GO
BP	GO:0006269	DNA replication, synthesis of RNA primer	IEP	Predicted GO
BP	GO:0006541	glutamine metabolic process	IEP	Predicted GO
BP	GO:0006542	glutamine biosynthetic process	IEP	Predicted GO
BP	GO:0008037	cell recognition	IEP	Predicted GO
BP	GO:0009064	glutamine family amino acid metabolic process	IEP	Predicted GO
BP	GO:0009084	glutamine family amino acid biosynthetic process	IEP	Predicted GO
BP	GO:0009314	response to radiation	IEP	Predicted GO
BP	GO:0009416	response to light stimulus	IEP	Predicted GO
BP	GO:0009581	detection of external stimulus	IEP	Predicted GO
BP	GO:0009582	detection of abiotic stimulus	IEP	Predicted GO
BP	GO:0009583	detection of light stimulus	IEP	Predicted GO
BP	GO:0009584	detection of visible light	IEP	Predicted GO
BP	GO:0009605	response to external stimulus	IEP	Predicted GO
BP	GO:0009628	response to abiotic stimulus	IEP	Predicted GO
MF	GO:0016160	amylase activity	IEP	Predicted GO
MF	GO:0016161	beta-amylase activity	IEP	Predicted GO
MF	GO:0016211	ammonia ligase activity	IEP	Predicted GO
CC	GO:0016459	myosin complex	IEP	Predicted GO
BP	GO:0016567	protein ubiquitination	IEP	Predicted GO
MF	GO:0016775	phosphotransferase activity, nitrogenous group as acceptor	IEP	Predicted GO
MF	GO:0016879	ligase activity, forming carbon-nitrogen bonds	IEP	Predicted GO
MF	GO:0016880	acid-ammonia (or amide) ligase activity	IEP	Predicted GO
BP	GO:0018298	protein-chromophore linkage	IEP	Predicted GO
BP	GO:0022414	reproductive process	IEP	Predicted GO
BP	GO:0032446	protein modification by small protein conjugation	IEP	Predicted GO
MF	GO:0034062	5'-3' RNA polymerase activity	IEP	Predicted GO
CC	GO:0044430	cytoskeletal part	IEP	Predicted GO
BP	GO:0048544	recognition of pollen	IEP	Predicted GO
BP	GO:0051606	detection of stimulus	IEP	Predicted GO
MF	GO:0097747	RNA polymerase activity	IEP	Predicted GO
BP	GO:1901605	alpha-amino acid metabolic process	IEP	Predicted GO
BP	GO:1901607	alpha-amino acid biosynthetic process	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR001611	Leu-rich_rpt	144	204
IPR000719	Prot_kinase_dom	678	957
IPR013210	LRR_N_plant-typ	29	68

External Links

No external refs found!

PSME_00007824-RA

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation