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  5. PSME_00009043-RA

PSME_00009043-RA


Description : (p52578|ifrh_soltu : 272.0) Isoflavone reductase homolog (EC 1.3.1.-) (CP100) - Solanum tuberosum (Potato) & (at4g39230 : 270.0) encodes a protein whose sequence is similar to phenylcoumaran benzylic ether reductase (PCBER), which catalyzes NADPH-dependent reduction of 8-5' linked lignans such as dehydrodiconiferyl alcohol to give isodihydrodehydrodiconiferyl alcohol.; NmrA-like negative transcriptional regulator family protein; FUNCTIONS IN: phenylcoumaran benzylic ether reductase activity; INVOLVED IN: response to cadmium ion; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: NAD(P)-binding domain (InterPro:IPR016040), NmrA-like (InterPro:IPR008030); BEST Arabidopsis thaliana protein match is: NmrA-like negative transcriptional regulator family protein (TAIR:AT1G75280.1); Has 1665 Blast hits to 1661 proteins in 371 species: Archae - 16; Bacteria - 474; Metazoa - 2; Fungi - 521; Plants - 522; Viruses - 3; Other Eukaryotes - 127 (source: NCBI BLink). & (reliability: 540.0) & (original description: no original description)


Gene families : OG_42_0000162 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000162_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00009043-RA
Cluster HCCA clusters: Cluster_150

Target Alias Description ECC score Gene Family Method Actions
Brara.I02648.1 No alias pinoresinol/lariciresinol reductase *(PLR) & EC_1.3... 0.02 Orthogroups_2024-Update
Glyma.06G030900 No alias NmrA-like negative transcriptional regulator family protein 0.03 Orthogroups_2024-Update
LOC_Os06g28550 No alias nmrA-like family domain containing protein, expressed 0.02 Orthogroups_2024-Update
MA_10427553g0010 No alias (at1g75290 : 214.0) encodes a protein whose sequence is... 0.04 Orthogroups_2024-Update
MA_10430372g0010 No alias (at4g39230 : 277.0) encodes a protein whose sequence is... 0.03 Orthogroups_2024-Update
MA_47247g0010 No alias (p52578|ifrh_soltu : 91.7) Isoflavone reductase homolog... 0.03 Orthogroups_2024-Update
PSME_00032830-RA No alias (at4g39230 : 307.0) encodes a protein whose sequence is... 0.04 Orthogroups_2024-Update
PSME_00044641-RA No alias (p52578|ifrh_soltu : 124.0) Isoflavone reductase homolog... 0.03 Orthogroups_2024-Update
PSME_00045113-RA No alias (at4g39230 : 265.0) encodes a protein whose sequence is... 0.05 Orthogroups_2024-Update
PSME_00045917-RA No alias (at1g75290 : 218.0) encodes a protein whose sequence is... 0.03 Orthogroups_2024-Update
Potri.007G123700 No alias NmrA-like negative transcriptional regulator family protein 0.02 Orthogroups_2024-Update
Seita.5G070500.1 No alias EC_1.3 oxidoreductase acting on CH-CH group of donor &... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004518 nuclease activity IEP Predicted GO
MF GO:0004519 endonuclease activity IEP Predicted GO
MF GO:0004521 endoribonuclease activity IEP Predicted GO
MF GO:0004523 RNA-DNA hybrid ribonuclease activity IEP Predicted GO
MF GO:0004540 ribonuclease activity IEP Predicted GO
MF GO:0004866 endopeptidase inhibitor activity IEP Predicted GO
BP GO:0006508 proteolysis IEP Predicted GO
BP GO:0006952 defense response IEP Predicted GO
MF GO:0008233 peptidase activity IEP Predicted GO
MF GO:0008236 serine-type peptidase activity IEP Predicted GO
BP GO:0009605 response to external stimulus IEP Predicted GO
BP GO:0009607 response to biotic stimulus IEP Predicted GO
BP GO:0009617 response to bacterium IEP Predicted GO
BP GO:0009620 response to fungus IEP Predicted GO
MF GO:0015267 channel activity IEP Predicted GO
MF GO:0016787 hydrolase activity IEP Predicted GO
MF GO:0016891 endoribonuclease activity, producing 5'-phosphomonoesters IEP Predicted GO
MF GO:0016893 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters IEP Predicted GO
MF GO:0017171 serine hydrolase activity IEP Predicted GO
MF GO:0022803 passive transmembrane transporter activity IEP Predicted GO
MF GO:0030414 peptidase inhibitor activity IEP Predicted GO
BP GO:0042742 defense response to bacterium IEP Predicted GO
BP GO:0043207 response to external biotic stimulus IEP Predicted GO
BP GO:0050832 defense response to fungus IEP Predicted GO
BP GO:0051704 multi-organism process IEP Predicted GO
BP GO:0051707 response to other organism IEP Predicted GO
MF GO:0061134 peptidase regulator activity IEP Predicted GO
MF GO:0061135 endopeptidase regulator activity IEP Predicted GO
MF GO:0070011 peptidase activity, acting on L-amino acid peptides IEP Predicted GO
BP GO:0098542 defense response to other organism IEP Predicted GO
MF GO:0140098 catalytic activity, acting on RNA IEP Predicted GO
InterPro domains Description Start Stop
IPR008030 NmrA-like 6 238
No external refs found!