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  5. PSME_00009226-RA

PSME_00009226-RA


Description : (at4g21160 : 102.0) ADP-ribosylation factor GTPase-activating protein containing zinc finger and C2 domains and a novel PI-3-P-binding protein region. Binds PI-3-P. Highest expression levels in flowering tissue, rosettes and roots. A member of ARF GAP domain (AGD), A thaliana has 15 members, grouped into four classes.; ZAC; FUNCTIONS IN: phospholipid binding, ARF GTPase activator activity; INVOLVED IN: intracellular protein transport; LOCATED IN: Golgi apparatus, plasma membrane, vacuole, membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Arf GTPase activating protein (InterPro:IPR001164), C2 membrane targeting protein (InterPro:IPR018029), C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), C2 calcium-dependent membrane targeting (InterPro:IPR000008); BEST Arabidopsis thaliana protein match is: ARF-GAP domain 13 (TAIR:AT4G05330.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 204.0) & (original description: no original description)


Gene families : OG_42_0000207 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000207_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00009226-RA
Cluster HCCA clusters: Cluster_90

Target Alias Description ECC score Gene Family Method Actions
At1g70810 No alias Protein C2-DOMAIN ABA-RELATED 7... 0.02 Orthogroups_2024-Update
Bradi1g26840 No alias Calcium-dependent lipid-binding (CaLB domain) family protein 0.02 Orthogroups_2024-Update
HORVU0Hr1G039050.2 No alias abscisic acid receptor recruitment factor *(CAR) 0.03 Orthogroups_2024-Update
LOC_Os07g31720 No alias GTPase activating protein, putative, expressed 0.02 Orthogroups_2024-Update
MA_24589g0010 No alias (at1g73580 : 121.0) Calcium-dependent lipid-binding... 0.05 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003993 acid phosphatase activity IEP Predicted GO
MF GO:0004857 enzyme inhibitor activity IEP Predicted GO
MF GO:0004866 endopeptidase inhibitor activity IEP Predicted GO
MF GO:0004869 cysteine-type endopeptidase inhibitor activity IEP Predicted GO
MF GO:0005319 lipid transporter activity IEP Predicted GO
MF GO:0005509 calcium ion binding IEP Predicted GO
BP GO:0006869 lipid transport IEP Predicted GO
BP GO:0006952 defense response IEP Predicted GO
BP GO:0007275 multicellular organism development IEP Predicted GO
BP GO:0009415 response to water IEP Predicted GO
MF GO:0016791 phosphatase activity IEP Predicted GO
MF GO:0030234 enzyme regulator activity IEP Predicted GO
MF GO:0030414 peptidase inhibitor activity IEP Predicted GO
BP GO:0032501 multicellular organismal process IEP Predicted GO
BP GO:0032502 developmental process IEP Predicted GO
MF GO:0042578 phosphoric ester hydrolase activity IEP Predicted GO
BP GO:0048856 anatomical structure development IEP Predicted GO
BP GO:0061024 membrane organization IEP Predicted GO
MF GO:0061134 peptidase regulator activity IEP Predicted GO
MF GO:0061135 endopeptidase regulator activity IEP Predicted GO
BP GO:0120009 intermembrane lipid transfer IEP Predicted GO
MF GO:0120013 intermembrane lipid transfer activity IEP Predicted GO
InterPro domains Description Start Stop
IPR000008 C2_dom 6 101
No external refs found!