PSME_00009508-RA

Description : (at5g13870 : 295.0) EXGT-A4, endoxyloglucan transferase,; xyloglucan endotransglucosylase/hydrolase 5 (XTH5); FUNCTIONS IN: hydrolase activity, acting on glycosyl bonds, hydrolase activity, hydrolyzing O-glycosyl compounds, xyloglucan:xyloglucosyl transferase activity; INVOLVED IN: carbohydrate metabolic process, cellular glucan metabolic process; LOCATED IN: endomembrane system, cell wall, apoplast; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Xyloglucan endotransglucosylase/hydrolase (InterPro:IPR016455), Xyloglucan endo-transglycosylase, C-terminal (InterPro:IPR010713), Concanavalin A-like lectin/glucanase (InterPro:IPR008985), Concanavalin A-like lectin/glucanase, subgroup (InterPro:IPR013320), Glycoside hydrolase, family 16 (InterPro:IPR000757), Glycoside hydrolase, family 16, active site (InterPro:IPR008263); BEST Arabidopsis thaliana protein match is: xyloglucan endotransglucosylase/hydrolase 4 (TAIR:AT2G06850.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). & (p93349|xth_tobac : 284.0) Probable xyloglucan endotransglucosylase/hydrolase protein precursor (EC 2.4.1.207) - Nicotiana tabacum (Common tobacco) & (reliability: 558.0) & (original description: no original description)

Gene families : OG_42_0000032 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000032_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Pseudotsuga release: PSME_00009508-RA
Cluster	HCCA clusters: Cluster_206

Target	Alias	Description	ECC score	Gene Family Method
A4A49_04196	No alias	xyloglucan endotransglucosylasehydrolase protein 9	0.03	Orthogroups_2024-Update
A4A49_21659	No alias	xyloglucan endotransglucosylasehydrolase protein 22	0.02	Orthogroups_2024-Update
At2g18800	No alias	Xyloglucan endotransglucosylase/hydrolase...	0.02	Orthogroups_2024-Update
At4g37800	No alias	Probable xyloglucan endotransglucosylase/hydrolase...	0.03	Orthogroups_2024-Update
Glyma.08G121200	No alias	xyloglucan endotransglucosylase/hydrolase 16	0.02	Orthogroups_2024-Update
Glyma.09G062600	No alias	xyloglucan endotransglycosylase 6	0.04	Orthogroups_2024-Update
Glyma.11G044800	No alias	xyloglucan endotransglucosylase/hydrolase 6	0.04	Orthogroups_2024-Update
Glyma.15G169100	No alias	xyloglucan endotransglycosylase 6	0.03	Orthogroups_2024-Update
HORVU7Hr1G098260.1	No alias	EC_2.4 glycosyltransferase	0.02	Orthogroups_2024-Update
HORVU7Hr1G098320.3	No alias	EC_2.4 glycosyltransferase	0.02	Orthogroups_2024-Update
HORVU7Hr1G098370.1	No alias	EC_2.4 glycosyltransferase	0.02	Orthogroups_2024-Update
MA_146337g0020	No alias	(at5g13870 : 266.0) EXGT-A4, endoxyloglucan...	0.03	Orthogroups_2024-Update
PSME_00001206-RA	No alias	(at4g03210 : 299.0) encodes a member of xyloglucan...	0.05	Orthogroups_2024-Update
PSME_00009509-RA	No alias	(at5g57530 : 295.0) xyloglucan...	0.05	Orthogroups_2024-Update
PSME_00013047-RA	No alias	(q41638\|xtha_phaan : 220.0) Xyloglucan...	0.04	Orthogroups_2024-Update
PSME_00015767-RA	No alias	(at4g25810 : 332.0) xyloglucan...	0.03	Orthogroups_2024-Update
PSME_00015769-RA	No alias	(p35694\|bru1_soybn : 351.0) Brassinosteroid-regulated...	0.03	Orthogroups_2024-Update
PSME_00015816-RA	No alias	(at4g25810 : 292.0) xyloglucan...	0.04	Orthogroups_2024-Update
PSME_00031691-RA	No alias	(p35694\|bru1_soybn : 332.0) Brassinosteroid-regulated...	0.03	Orthogroups_2024-Update
PSME_00033177-RA	No alias	(at4g25810 : 347.0) xyloglucan...	0.04	Orthogroups_2024-Update
PSME_00045375-RA	No alias	(p93349\|xth_tobac : 273.0) Probable xyloglucan...	0.04	Orthogroups_2024-Update
PSME_00055766-RA	No alias	(q8lnz5\|xthb_phaan : 137.0) Probable xyloglucan...	0.03	Orthogroups_2024-Update
Potri.003G159700	No alias	xyloglucan endotransglucosylase/hydrolase 5	0.04	Orthogroups_2024-Update
Pp1s168_54V6	No alias	xyloglucan endotransglucosylase hydrolase protein a	0.02	Orthogroups_2024-Update
Pp1s309_28V6	No alias	xyloglucan endotransglycosylase	0.02	Orthogroups_2024-Update
Pp1s309_38V6	No alias	xyloglucan endotransglycosylase	0.03	Orthogroups_2024-Update
Sobic.006G228100.1	No alias	EC_2.4 glycosyltransferase	0.03	Orthogroups_2024-Update
Solyc01g099630	No alias	xyloglucan endotransglucosylase-hydrolase 1	0.04	Orthogroups_2024-Update
Solyc09g008320	No alias	Xyloglucan endotransglucosylase/hydrolase (AHRD V3.3 ***...	0.03	Orthogroups_2024-Update
Solyc12g011030	No alias	xyloglucan endotransglucosylase-hydrolase 9	0.02	Orthogroups_2024-Update
Sopen12g008060	No alias	Glycosyl hydrolases family 16	0.02	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds	IEA	InterProScan predictions
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005576	extracellular region	None	Extended
CC	GO:0005618	cell wall	IEA	InterProScan predictions
BP	GO:0005975	carbohydrate metabolic process	IEA	InterProScan predictions
BP	GO:0005976	polysaccharide metabolic process	None	Extended
BP	GO:0006073	cellular glucan metabolic process	IEA	InterProScan predictions
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0016740	transferase activity	None	Extended
MF	GO:0016757	transferase activity, transferring glycosyl groups	None	Extended
MF	GO:0016758	transferase activity, transferring hexosyl groups	None	Extended
MF	GO:0016762	xyloglucan:xyloglucosyl transferase activity	IEA	InterProScan predictions
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016798	hydrolase activity, acting on glycosyl bonds	None	Extended
CC	GO:0030312	external encapsulating structure	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044042	glucan metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044262	cellular carbohydrate metabolic process	None	Extended
BP	GO:0044264	cellular polysaccharide metabolic process	None	Extended
CC	GO:0044464	cell part	None	Extended
MF	GO:0046527	glucosyltransferase activity	None	Extended
CC	GO:0048046	apoplast	IEA	InterProScan predictions
BP	GO:0071704	organic substance metabolic process	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0000041	transition metal ion transport	IEP	Predicted GO
CC	GO:0000159	protein phosphatase type 2A complex	IEP	Predicted GO
MF	GO:0003919	FMN adenylyltransferase activity	IEP	Predicted GO
MF	GO:0004089	carbonate dehydratase activity	IEP	Predicted GO
MF	GO:0005381	iron ion transmembrane transporter activity	IEP	Predicted GO
BP	GO:0006766	vitamin metabolic process	IEP	Predicted GO
BP	GO:0006767	water-soluble vitamin metabolic process	IEP	Predicted GO
BP	GO:0006771	riboflavin metabolic process	IEP	Predicted GO
BP	GO:0006812	cation transport	IEP	Predicted GO
BP	GO:0006826	iron ion transport	IEP	Predicted GO
BP	GO:0007165	signal transduction	IEP	Predicted GO
CC	GO:0008287	protein serine/threonine phosphatase complex	IEP	Predicted GO
BP	GO:0009110	vitamin biosynthetic process	IEP	Predicted GO
BP	GO:0009231	riboflavin biosynthetic process	IEP	Predicted GO
MF	GO:0016846	carbon-sulfur lyase activity	IEP	Predicted GO
MF	GO:0019208	phosphatase regulator activity	IEP	Predicted GO
MF	GO:0019888	protein phosphatase regulator activity	IEP	Predicted GO
BP	GO:0034755	iron ion transmembrane transport	IEP	Predicted GO
BP	GO:0042364	water-soluble vitamin biosynthetic process	IEP	Predicted GO
BP	GO:0042726	flavin-containing compound metabolic process	IEP	Predicted GO
BP	GO:0042727	flavin-containing compound biosynthetic process	IEP	Predicted GO
MF	GO:0043531	ADP binding	IEP	Predicted GO
MF	GO:0046915	transition metal ion transmembrane transporter activity	IEP	Predicted GO
MF	GO:0070566	adenylyltransferase activity	IEP	Predicted GO
CC	GO:1903293	phosphatase complex	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR000757	GH16	38	214
IPR010713	XET_C	237	283

External Links

No external refs found!

PSME_00009508-RA

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation