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  5. PSME_00009509-RA

PSME_00009509-RA


Description : (at5g57530 : 295.0) xyloglucan endotransglucosylase/hydrolase 12 (XTH12); CONTAINS InterPro DOMAIN/s: Xyloglucan endotransglucosylase/hydrolase (InterPro:IPR016455), Xyloglucan endo-transglycosylase, C-terminal (InterPro:IPR010713), Concanavalin A-like lectin/glucanase, subgroup (InterPro:IPR013320), Concanavalin A-like lectin/glucanase (InterPro:IPR008985), Glycoside hydrolase, family 16 (InterPro:IPR000757), Glycoside hydrolase, family 16, active site (InterPro:IPR008263); BEST Arabidopsis thaliana protein match is: xyloglucan endotransglucosylase/hydrolase 13 (TAIR:AT5G57540.1); Has 2233 Blast hits to 2211 proteins in 307 species: Archae - 0; Bacteria - 290; Metazoa - 0; Fungi - 455; Plants - 1386; Viruses - 0; Other Eukaryotes - 102 (source: NCBI BLink). & (q39857|xth_soybn : 284.0) Probable xyloglucan endotransglucosylase/hydrolase precursor (EC 2.4.1.207) (Fragment) - Glycine max (Soybean) & (reliability: 552.0) & (original description: no original description)


Gene families : OG_42_0000032 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000032_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00009509-RA
Cluster HCCA clusters: Cluster_40

Target Alias Description ECC score Gene Family Method Actions
119243 No alias xyloglucan endotransglucosylase/hydrolase 5 0.03 Orthogroups_2024-Update
A4A49_04196 No alias xyloglucan endotransglucosylasehydrolase protein 9 0.02 Orthogroups_2024-Update
A4A49_17794 No alias putative xyloglucan endotransglucosylasehydrolase protein 26 0.03 Orthogroups_2024-Update
A4A49_26736 No alias xyloglucan endotransglucosylasehydrolase protein 15 0.03 Orthogroups_2024-Update
At1g10550 No alias Probable xyloglucan endotransglucosylase/hydrolase... 0.02 Orthogroups_2024-Update
At3g25050 No alias Xyloglucan endotransglucosylase/hydrolase protein 3... 0.02 Orthogroups_2024-Update
At4g13090 No alias Xyloglucan endotransglucosylase/hydrolase protein 2... 0.02 Orthogroups_2024-Update
GRMZM2G004699 No alias xyloglucan endotransglucosylase/hydrolase 5 0.03 Orthogroups_2024-Update
GRMZM2G392125 No alias xyloglucan endotransglucosylase/hydrolase 24 0.03 Orthogroups_2024-Update
Glyma.10G054200 No alias xyloglucan endotransglucosylase/hydrolase 32 0.03 Orthogroups_2024-Update
Glyma.11G044800 No alias xyloglucan endotransglucosylase/hydrolase 6 0.03 Orthogroups_2024-Update
Glyma.11G193600 No alias xyloglucan endotransglucosylase/hydrolase 32 0.03 Orthogroups_2024-Update
Glyma.12G080100 No alias xyloglucan endotransglucosylase/hydrolase 32 0.03 Orthogroups_2024-Update
Glyma.12G178000 No alias xyloglucan endotransglucosylase/hydrolase 32 0.03 Orthogroups_2024-Update
Glyma.17G157400 No alias xyloglucan endotransglucosylase/hydrolase 6 0.03 Orthogroups_2024-Update
LOC_Os04g51460 No alias glycosyl hydrolases family 16, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os06g48180 No alias glycosyl hydrolases family 16, putative, expressed 0.02 Orthogroups_2024-Update
MA_10430695g0010 No alias (p35694|bru1_soybn : 327.0) Brassinosteroid-regulated... 0.03 Orthogroups_2024-Update
MA_20669g0010 No alias (at2g36870 : 290.0) xyloglucan... 0.03 Orthogroups_2024-Update
MA_46026g0020 No alias (at4g03210 : 242.0) encodes a member of xyloglucan... 0.03 Orthogroups_2024-Update
MA_476450g0010 No alias (at5g65730 : 440.0) xyloglucan... 0.04 Orthogroups_2024-Update
MA_75919g0010 No alias (at2g36870 : 300.0) xyloglucan... 0.05 Orthogroups_2024-Update
PSME_00001206-RA No alias (at4g03210 : 299.0) encodes a member of xyloglucan... 0.04 Orthogroups_2024-Update
PSME_00009508-RA No alias (at5g13870 : 295.0) EXGT-A4, endoxyloglucan... 0.05 Orthogroups_2024-Update
PSME_00015767-RA No alias (at4g25810 : 332.0) xyloglucan... 0.04 Orthogroups_2024-Update
PSME_00015769-RA No alias (p35694|bru1_soybn : 351.0) Brassinosteroid-regulated... 0.03 Orthogroups_2024-Update
PSME_00015816-RA No alias (at4g25810 : 292.0) xyloglucan... 0.05 Orthogroups_2024-Update
PSME_00031691-RA No alias (p35694|bru1_soybn : 332.0) Brassinosteroid-regulated... 0.05 Orthogroups_2024-Update
PSME_00033177-RA No alias (at4g25810 : 347.0) xyloglucan... 0.05 Orthogroups_2024-Update
PSME_00047371-RA No alias (p35694|bru1_soybn : 289.0) Brassinosteroid-regulated... 0.04 Orthogroups_2024-Update
PSME_00047561-RA No alias (at2g36870 : 281.0) xyloglucan... 0.03 Orthogroups_2024-Update
Potri.002G244200 No alias xyloglucan endotransglucosylase/hydrolase 2 0.03 Orthogroups_2024-Update
Potri.003G159700 No alias xyloglucan endotransglucosylase/hydrolase 5 0.04 Orthogroups_2024-Update
Potri.006G122900 No alias xyloglucan endotransglucosylase/hydrolase 32 0.03 Orthogroups_2024-Update
Potri.011G077400 No alias xyloglucan endotransglucosylase/hydrolase 15 0.04 Orthogroups_2024-Update
Potri.018G095100 No alias xyloglucan endotransglycosylase 6 0.03 Orthogroups_2024-Update
Pp1s309_36V6 No alias Probable xyloglucan endotransglucosylase/hydrolase... 0.01 Orthogroups_2024-Update
Seita.2G313800.1 No alias xyloglucan endotransglucosylase/hydrolase *(XTH) &... 0.03 Orthogroups_2024-Update
Seita.9G337200.1 No alias xyloglucan endotransglucosylase/hydrolase *(XTH) &... 0.03 Orthogroups_2024-Update
Solyc01g099630 No alias xyloglucan endotransglucosylase-hydrolase 1 0.03 Orthogroups_2024-Update
Solyc02g091920 No alias xyloglucan endotransglucosylase-hydrolase 7 0.02 Orthogroups_2024-Update
Solyc11g065600 No alias xyloglucan endotransglucosylase-hydrolase 4 0.02 Orthogroups_2024-Update
Solyc12g098610 No alias Xyloglucan endotransglucosylase/hydrolase (AHRD V3.3 ***... 0.04 Orthogroups_2024-Update
Sopen07g026530 No alias Glycosyl hydrolases family 16 0.03 Orthogroups_2024-Update
Sopen12g006400 No alias Glycosyl hydrolases family 16 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEA InterProScan predictions
CC GO:0005618 cell wall IEA InterProScan predictions
BP GO:0005975 carbohydrate metabolic process IEA InterProScan predictions
BP GO:0006073 cellular glucan metabolic process IEA InterProScan predictions
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEA InterProScan predictions
CC GO:0048046 apoplast IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0004474 malate synthase activity IEP Predicted GO
MF GO:0004672 protein kinase activity IEP Predicted GO
MF GO:0005515 protein binding IEP Predicted GO
BP GO:0006081 cellular aldehyde metabolic process IEP Predicted GO
BP GO:0006097 glyoxylate cycle IEP Predicted GO
BP GO:0006464 cellular protein modification process IEP Predicted GO
BP GO:0006468 protein phosphorylation IEP Predicted GO
BP GO:0006629 lipid metabolic process IEP Predicted GO
BP GO:0006793 phosphorus metabolic process IEP Predicted GO
BP GO:0006796 phosphate-containing compound metabolic process IEP Predicted GO
BP GO:0006807 nitrogen compound metabolic process IEP Predicted GO
BP GO:0006855 drug transmembrane transport IEP Predicted GO
MF GO:0008374 O-acyltransferase activity IEP Predicted GO
BP GO:0009605 response to external stimulus IEP Predicted GO
BP GO:0009607 response to biotic stimulus IEP Predicted GO
BP GO:0009617 response to bacterium IEP Predicted GO
BP GO:0009620 response to fungus IEP Predicted GO
MF GO:0015238 drug transmembrane transporter activity IEP Predicted GO
BP GO:0015893 drug transport IEP Predicted GO
BP GO:0016197 endosomal transport IEP Predicted GO
MF GO:0016301 kinase activity IEP Predicted GO
BP GO:0016310 phosphorylation IEP Predicted GO
BP GO:0016482 cytosolic transport IEP Predicted GO
MF GO:0016746 transferase activity, transferring acyl groups IEP Predicted GO
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Predicted GO
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Predicted GO
MF GO:0017076 purine nucleotide binding IEP Predicted GO
BP GO:0019538 protein metabolic process IEP Predicted GO
MF GO:0030554 adenyl nucleotide binding IEP Predicted GO
CC GO:0030906 retromer, cargo-selective complex IEP Predicted GO
MF GO:0032553 ribonucleotide binding IEP Predicted GO
MF GO:0032555 purine ribonucleotide binding IEP Predicted GO
MF GO:0032559 adenyl ribonucleotide binding IEP Predicted GO
BP GO:0036211 protein modification process IEP Predicted GO
BP GO:0042147 retrograde transport, endosome to Golgi IEP Predicted GO
BP GO:0042742 defense response to bacterium IEP Predicted GO
BP GO:0043207 response to external biotic stimulus IEP Predicted GO
BP GO:0043412 macromolecule modification IEP Predicted GO
BP GO:0044267 cellular protein metabolic process IEP Predicted GO
BP GO:0046487 glyoxylate metabolic process IEP Predicted GO
MF GO:0046912 transferase activity, transferring acyl groups, acyl groups converted into alkyl on transfer IEP Predicted GO
BP GO:0050832 defense response to fungus IEP Predicted GO
BP GO:0051704 multi-organism process IEP Predicted GO
BP GO:0051707 response to other organism IEP Predicted GO
BP GO:0098542 defense response to other organism IEP Predicted GO
MF GO:0140096 catalytic activity, acting on a protein IEP Predicted GO
BP GO:1901564 organonitrogen compound metabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR010713 XET_C 238 283
IPR000757 GH16 38 215
No external refs found!