Description : (p29063|pr4b_tobac : 131.0) Pathogenesis-related protein PR-4B precursor - Nicotiana tabacum (Common tobacco) & (at3g04720 : 125.0) Encodes a protein similar to the antifungal chitin-binding protein hevein from rubber tree latex. mRNA levels increase in response to ethylene and turnip crinkle virus infection.; pathogenesis-related 4 (PR4); FUNCTIONS IN: chitin binding; INVOLVED IN: in 6 processes; LOCATED IN: endomembrane system; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Barwin (InterPro:IPR001153), Glycoside hydrolase, family 19, catalytic (InterPro:IPR000726), Barwin-related endoglucanase (InterPro:IPR009009), Chitin-binding, type 1, conserved site (InterPro:IPR018371), Barwin-like endoglucanase (InterPro:IPR014733), Barwin, conserved site (InterPro:IPR018226), Chitin-binding, type 1 (InterPro:IPR001002); BEST Arabidopsis thaliana protein match is: basic chitinase (TAIR:AT3G12500.1); Has 1702 Blast hits to 1458 proteins in 199 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 253; Plants - 1414; Viruses - 10; Other Eukaryotes - 25 (source: NCBI BLink). & (reliability: 250.0) & (original description: no original description)
Gene families : OG_42_0001762 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001762_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | Pseudotsuga release: PSME_00009548-RA | |
Cluster | HCCA clusters: Cluster_150 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
At3g04720 | No alias | Hevein-like preproprotein... | 0.03 | Orthogroups_2024-Update | |
Brara.C03072.1 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update | |
GRMZM2G117971 | No alias | pathogenesis-related 4 | 0.03 | Orthogroups_2024-Update | |
HORVU3Hr1G113620.1 | No alias | Unknown function | 0.04 | Orthogroups_2024-Update | |
LOC_Os11g37960 | No alias | WIP4 - Wound-induced protein precursor, expressed | 0.02 | Orthogroups_2024-Update | |
MA_10428528g0010 | No alias | (at3g04720 : 124.0) Encodes a protein similar to the... | 0.07 | Orthogroups_2024-Update | |
MA_10434174g0010 | No alias | (p29063|pr4b_tobac : 207.0) Pathogenesis-related protein... | 0.04 | Orthogroups_2024-Update | |
MA_321399g0010 | No alias | (p09761|win1_soltu : 201.0) Wound-induced protein WIN1... | 0.09 | Orthogroups_2024-Update | |
MA_8035959g0010 | No alias | (p29063|pr4b_tobac : 191.0) Pathogenesis-related protein... | 0.04 | Orthogroups_2024-Update | |
PSME_00054279-RA | No alias | (p09761|win1_soltu : 201.0) Wound-induced protein WIN1... | 0.07 | Orthogroups_2024-Update | |
Seita.8G169900.1 | No alias | Unknown function | 0.02 | Orthogroups_2024-Update | |
Seita.8G170000.1 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update | |
Seita.8G170100.1 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003676 | nucleic acid binding | IEA | InterProScan predictions |
MF | GO:0008270 | zinc ion binding | IEA | InterProScan predictions |
BP | GO:0042742 | defense response to bacterium | IEA | InterProScan predictions |
BP | GO:0050832 | defense response to fungus | IEA | InterProScan predictions |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds | IEP | Predicted GO |
MF | GO:0004568 | chitinase activity | IEP | Predicted GO |
MF | GO:0004751 | ribose-5-phosphate isomerase activity | IEP | Predicted GO |
MF | GO:0004866 | endopeptidase inhibitor activity | IEP | Predicted GO |
BP | GO:0006022 | aminoglycan metabolic process | IEP | Predicted GO |
BP | GO:0006026 | aminoglycan catabolic process | IEP | Predicted GO |
BP | GO:0006030 | chitin metabolic process | IEP | Predicted GO |
BP | GO:0006032 | chitin catabolic process | IEP | Predicted GO |
BP | GO:0006040 | amino sugar metabolic process | IEP | Predicted GO |
BP | GO:0006081 | cellular aldehyde metabolic process | IEP | Predicted GO |
MF | GO:0008061 | chitin binding | IEP | Predicted GO |
BP | GO:0009052 | pentose-phosphate shunt, non-oxidative branch | IEP | Predicted GO |
BP | GO:0009056 | catabolic process | IEP | Predicted GO |
BP | GO:0009057 | macromolecule catabolic process | IEP | Predicted GO |
MF | GO:0016798 | hydrolase activity, acting on glycosyl bonds | IEP | Predicted GO |
MF | GO:0016853 | isomerase activity | IEP | Predicted GO |
MF | GO:0016860 | intramolecular oxidoreductase activity | IEP | Predicted GO |
MF | GO:0016861 | intramolecular oxidoreductase activity, interconverting aldoses and ketoses | IEP | Predicted GO |
MF | GO:0016866 | intramolecular transferase activity | IEP | Predicted GO |
MF | GO:0016868 | intramolecular transferase activity, phosphotransferases | IEP | Predicted GO |
BP | GO:0016998 | cell wall macromolecule catabolic process | IEP | Predicted GO |
BP | GO:0017144 | drug metabolic process | IEP | Predicted GO |
BP | GO:0019682 | glyceraldehyde-3-phosphate metabolic process | IEP | Predicted GO |
MF | GO:0030414 | peptidase inhibitor activity | IEP | Predicted GO |
BP | GO:0042737 | drug catabolic process | IEP | Predicted GO |
BP | GO:0044036 | cell wall macromolecule metabolic process | IEP | Predicted GO |
BP | GO:0044248 | cellular catabolic process | IEP | Predicted GO |
BP | GO:0046348 | amino sugar catabolic process | IEP | Predicted GO |
MF | GO:0061134 | peptidase regulator activity | IEP | Predicted GO |
MF | GO:0061135 | endopeptidase regulator activity | IEP | Predicted GO |
BP | GO:1901071 | glucosamine-containing compound metabolic process | IEP | Predicted GO |
BP | GO:1901072 | glucosamine-containing compound catabolic process | IEP | Predicted GO |
BP | GO:1901135 | carbohydrate derivative metabolic process | IEP | Predicted GO |
BP | GO:1901136 | carbohydrate derivative catabolic process | IEP | Predicted GO |
BP | GO:1901565 | organonitrogen compound catabolic process | IEP | Predicted GO |
BP | GO:1901575 | organic substance catabolic process | IEP | Predicted GO |
No external refs found! |