Description : (at4g07960 : 274.0) encodes a gene similar to cellulose synthase; Cellulose-synthase-like C12 (CSLC12); FUNCTIONS IN: cellulose synthase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 2 (InterPro:IPR001173); BEST Arabidopsis thaliana protein match is: Cellulose-synthase-like C5 (TAIR:AT4G31590.1); Has 5318 Blast hits to 5313 proteins in 1549 species: Archae - 201; Bacteria - 4094; Metazoa - 52; Fungi - 109; Plants - 510; Viruses - 19; Other Eukaryotes - 333 (source: NCBI BLink). & (reliability: 548.0) & (original description: no original description)
Gene families : OG_42_0000129 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000129_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | Pseudotsuga release: PSME_00009942-RA | |
Cluster | HCCA clusters: Cluster_89 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
230176 | No alias | Nucleotide-diphospho-sugar transferases superfamily protein | 0.03 | Orthogroups_2024-Update | |
A4A49_28293 | No alias | glucomannan 4-beta-mannosyltransferase 9 | 0.03 | Orthogroups_2024-Update | |
Bradi3g06740 | No alias | Nucleotide-diphospho-sugar transferases superfamily protein | 0.03 | Orthogroups_2024-Update | |
GRMZM2G028286 | No alias | Cellulose-synthase-like C12 | 0.03 | Orthogroups_2024-Update | |
PSME_00010937-RA | No alias | (at4g31590 : 165.0) encodes a gene similar to cellulose... | 0.01 | Orthogroups_2024-Update | |
PSME_00016846-RA | No alias | (at5g03760 : 284.0) encodes a beta-mannan synthase that... | 0.04 | Orthogroups_2024-Update | |
PSME_00019217-RA | No alias | (at4g31590 : 185.0) encodes a gene similar to cellulose... | 0.05 | Orthogroups_2024-Update | |
PSME_00039709-RA | No alias | (at5g03760 : 369.0) encodes a beta-mannan synthase that... | 0.01 | Orthogroups_2024-Update | |
PSME_00054676-RA | No alias | (at4g31590 : 540.0) encodes a gene similar to cellulose... | 0.01 | Orthogroups_2024-Update | |
Potri.006G116900 | No alias | Nucleotide-diphospho-sugar transferases superfamily protein | 0.02 | Orthogroups_2024-Update |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
CC | GO:0000786 | nucleosome | IEP | Predicted GO |
MF | GO:0004650 | polygalacturonase activity | IEP | Predicted GO |
BP | GO:0006325 | chromatin organization | IEP | Predicted GO |
BP | GO:0006334 | nucleosome assembly | IEP | Predicted GO |
MF | GO:0009055 | electron transfer activity | IEP | Predicted GO |
BP | GO:0009690 | cytokinin metabolic process | IEP | Predicted GO |
BP | GO:0009772 | photosynthetic electron transport in photosystem II | IEP | Predicted GO |
BP | GO:0010817 | regulation of hormone levels | IEP | Predicted GO |
MF | GO:0015035 | protein disulfide oxidoreductase activity | IEP | Predicted GO |
MF | GO:0015036 | disulfide oxidoreductase activity | IEP | Predicted GO |
MF | GO:0016491 | oxidoreductase activity | IEP | Predicted GO |
MF | GO:0016830 | carbon-carbon lyase activity | IEP | Predicted GO |
MF | GO:0016831 | carboxy-lyase activity | IEP | Predicted GO |
MF | GO:0019139 | cytokinin dehydrogenase activity | IEP | Predicted GO |
MF | GO:0019842 | vitamin binding | IEP | Predicted GO |
BP | GO:0022607 | cellular component assembly | IEP | Predicted GO |
MF | GO:0030170 | pyridoxal phosphate binding | IEP | Predicted GO |
CC | GO:0032993 | protein-DNA complex | IEP | Predicted GO |
BP | GO:0034622 | cellular protein-containing complex assembly | IEP | Predicted GO |
BP | GO:0034728 | nucleosome organization | IEP | Predicted GO |
BP | GO:0034754 | cellular hormone metabolic process | IEP | Predicted GO |
BP | GO:0042445 | hormone metabolic process | IEP | Predicted GO |
BP | GO:0043933 | protein-containing complex subunit organization | IEP | Predicted GO |
CC | GO:0044815 | DNA packaging complex | IEP | Predicted GO |
MF | GO:0045156 | electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity | IEP | Predicted GO |
MF | GO:0048037 | cofactor binding | IEP | Predicted GO |
MF | GO:0050662 | coenzyme binding | IEP | Predicted GO |
BP | GO:0055114 | oxidation-reduction process | IEP | Predicted GO |
BP | GO:0065003 | protein-containing complex assembly | IEP | Predicted GO |
BP | GO:0065004 | protein-DNA complex assembly | IEP | Predicted GO |
BP | GO:0065008 | regulation of biological quality | IEP | Predicted GO |
MF | GO:0070279 | vitamin B6 binding | IEP | Predicted GO |
BP | GO:0071824 | protein-DNA complex subunit organization | IEP | Predicted GO |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR001173 | Glyco_trans_2-like | 7 | 147 |
No external refs found! |