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  5. PSME_00009955-RA

PSME_00009955-RA


Description : (at1g45688 : 172.0) unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G42860.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 344.0) & (original description: no original description)


Gene families : OG_42_0000892 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000892_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00009955-RA
Cluster HCCA clusters: Cluster_14

Target Alias Description ECC score Gene Family Method Actions
75450 No alias Function unknown 0.02 Orthogroups_2024-Update
A4A49_26766 No alias hypothetical protein 0.02 Orthogroups_2024-Update
Bradi5g10200 No alias Function unknown 0.03 Orthogroups_2024-Update
Brara.G00641.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Glyma.07G084600 No alias Function unknown 0.03 Orthogroups_2024-Update
Glyma.11G097100 No alias Function unknown 0.03 Orthogroups_2024-Update
PSME_00052532-RA No alias (at1g45688 : 303.0) unknown protein; FUNCTIONS IN:... 0.03 Orthogroups_2024-Update
Seita.1G266300.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Seita.3G004500.1 No alias microtubule-interacting component *(CC) of cellulose... 0.03 Orthogroups_2024-Update
Seita.7G099300.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sopen02g035650 No alias Late embryogenesis abundant protein 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP Predicted GO
BP GO:0006952 defense response IEP Predicted GO
MF GO:0008171 O-methyltransferase activity IEP Predicted GO
MF GO:0043565 sequence-specific DNA binding IEP Predicted GO
BP GO:0050789 regulation of biological process IEP Predicted GO
BP GO:0050794 regulation of cellular process IEP Predicted GO
MF GO:0051287 NAD binding IEP Predicted GO
BP GO:0065007 biological regulation IEP Predicted GO
MF GO:0140110 transcription regulator activity IEP Predicted GO
InterPro domains Description Start Stop
IPR004864 LEA_2 187 290
No external refs found!