1. Home
  2. Species
  3. Pseudotsuga menziesii
  4. Sequence
  5. PSME_00010166-RA

PSME_00010166-RA


Description : (at2g17500 : 377.0) Auxin efflux carrier family protein; FUNCTIONS IN: auxin:hydrogen symporter activity; INVOLVED IN: auxin polar transport, transmembrane transport; LOCATED IN: endomembrane system, integral to membrane; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Auxin efflux carrier (InterPro:IPR004776); BEST Arabidopsis thaliana protein match is: Auxin efflux carrier family protein (TAIR:AT5G65980.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). & (reliability: 754.0) & (original description: no original description)


Gene families : OG_42_0000399 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000399_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Pseudotsuga release: PSME_00010166-RA
Cluster HCCA clusters: Cluster_178

Target Alias Description ECC score Gene Family Method Actions
Bradi2g61980 No alias Auxin efflux carrier family protein 0.04 Orthogroups_2024-Update
Bradi3g60730 No alias Auxin efflux carrier family protein 0.03 Orthogroups_2024-Update
Brara.H00235.1 No alias auxin efflux transporter *(PILS) & auxin transporter *(PILS) 0.04 Orthogroups_2024-Update
Glyma.01G157700 No alias Auxin efflux carrier family protein 0.03 Orthogroups_2024-Update
Glyma.03G113600 No alias Auxin efflux carrier family protein 0.04 Orthogroups_2024-Update
Glyma.09G195600 No alias Auxin efflux carrier family protein 0.03 Orthogroups_2024-Update
Glyma.09G271100 No alias Auxin efflux carrier family protein 0.03 Orthogroups_2024-Update
Glyma.11G088600 No alias Auxin efflux carrier family protein 0.03 Orthogroups_2024-Update
LOC_Os08g09190 No alias auxin efflux carrier component, putative, expressed 0.02 Orthogroups_2024-Update
MA_21662g0010 No alias (at5g65980 : 409.0) Auxin efflux carrier family protein;... 0.03 Orthogroups_2024-Update
Potri.011G145700 No alias Auxin efflux carrier family protein 0.03 Orthogroups_2024-Update
Pp1s89_51V6 No alias auxin efflux carrier auxin transport protein 0.02 Orthogroups_2024-Update
Seita.1G228300.1 No alias auxin transporter *(PILS) & auxin efflux transporter *(PILS) 0.03 Orthogroups_2024-Update
Sobic.002G292100.3 No alias auxin efflux transporter *(PILS) & auxin transporter *(PILS) 0.03 Orthogroups_2024-Update
Sobic.004G210900.1 No alias auxin efflux transporter *(PILS) & auxin transporter *(PILS) 0.03 Orthogroups_2024-Update
Solyc02g091240 No alias Auxin efflux carrier (AHRD V3.3 *** A0A103XKJ3_CYNCS) 0.03 Orthogroups_2024-Update
Sopen12g031650 No alias Membrane transport protein 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
CC GO:0016021 integral component of membrane IEA InterProScan predictions
BP GO:0055085 transmembrane transport IEA InterProScan predictions
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Predicted GO
MF GO:0004592 pantoate-beta-alanine ligase activity IEP Predicted GO
MF GO:0004672 protein kinase activity IEP Predicted GO
MF GO:0005215 transporter activity IEP Predicted GO
MF GO:0005524 ATP binding IEP Predicted GO
BP GO:0006020 inositol metabolic process IEP Predicted GO
BP GO:0006066 alcohol metabolic process IEP Predicted GO
BP GO:0006464 cellular protein modification process IEP Predicted GO
BP GO:0006468 protein phosphorylation IEP Predicted GO
BP GO:0006766 vitamin metabolic process IEP Predicted GO
BP GO:0006767 water-soluble vitamin metabolic process IEP Predicted GO
BP GO:0006793 phosphorus metabolic process IEP Predicted GO
BP GO:0006796 phosphate-containing compound metabolic process IEP Predicted GO
BP GO:0006813 potassium ion transport IEP Predicted GO
BP GO:0007165 signal transduction IEP Predicted GO
MF GO:0008144 drug binding IEP Predicted GO
MF GO:0008324 cation transmembrane transporter activity IEP Predicted GO
BP GO:0009110 vitamin biosynthetic process IEP Predicted GO
MF GO:0015079 potassium ion transmembrane transporter activity IEP Predicted GO
MF GO:0015095 magnesium ion transmembrane transporter activity IEP Predicted GO
MF GO:0015399 primary active transmembrane transporter activity IEP Predicted GO
MF GO:0015405 P-P-bond-hydrolysis-driven transmembrane transporter activity IEP Predicted GO
BP GO:0015693 magnesium ion transport IEP Predicted GO
BP GO:0015939 pantothenate metabolic process IEP Predicted GO
BP GO:0015940 pantothenate biosynthetic process IEP Predicted GO
MF GO:0016301 kinase activity IEP Predicted GO
BP GO:0016310 phosphorylation IEP Predicted GO
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP Predicted GO
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Predicted GO
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Predicted GO
MF GO:0016881 acid-amino acid ligase activity IEP Predicted GO
MF GO:0017076 purine nucleotide binding IEP Predicted GO
BP GO:0019310 inositol catabolic process IEP Predicted GO
BP GO:0019538 protein metabolic process IEP Predicted GO
BP GO:0019751 polyol metabolic process IEP Predicted GO
MF GO:0022804 active transmembrane transporter activity IEP Predicted GO
MF GO:0022857 transmembrane transporter activity IEP Predicted GO
MF GO:0022890 inorganic cation transmembrane transporter activity IEP Predicted GO
BP GO:0030001 metal ion transport IEP Predicted GO
MF GO:0030554 adenyl nucleotide binding IEP Predicted GO
MF GO:0032553 ribonucleotide binding IEP Predicted GO
MF GO:0032555 purine ribonucleotide binding IEP Predicted GO
MF GO:0032559 adenyl ribonucleotide binding IEP Predicted GO
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Predicted GO
MF GO:0036094 small molecule binding IEP Predicted GO
BP GO:0036211 protein modification process IEP Predicted GO
BP GO:0042364 water-soluble vitamin biosynthetic process IEP Predicted GO
BP GO:0042398 cellular modified amino acid biosynthetic process IEP Predicted GO
MF GO:0042623 ATPase activity, coupled IEP Predicted GO
MF GO:0042626 ATPase activity, coupled to transmembrane movement of substances IEP Predicted GO
MF GO:0043168 anion binding IEP Predicted GO
BP GO:0043412 macromolecule modification IEP Predicted GO
MF GO:0043492 ATPase activity, coupled to movement of substances IEP Predicted GO
BP GO:0044267 cellular protein metabolic process IEP Predicted GO
BP GO:0044275 cellular carbohydrate catabolic process IEP Predicted GO
BP GO:0046164 alcohol catabolic process IEP Predicted GO
BP GO:0046174 polyol catabolic process IEP Predicted GO
MF GO:0046873 metal ion transmembrane transporter activity IEP Predicted GO
MF GO:0050113 inositol oxygenase activity IEP Predicted GO
BP GO:0070838 divalent metal ion transport IEP Predicted GO
BP GO:0071805 potassium ion transmembrane transport IEP Predicted GO
BP GO:0072511 divalent inorganic cation transport IEP Predicted GO
MF GO:0097367 carbohydrate derivative binding IEP Predicted GO
MF GO:0140096 catalytic activity, acting on a protein IEP Predicted GO
MF GO:1901265 nucleoside phosphate binding IEP Predicted GO
BP GO:1901615 organic hydroxy compound metabolic process IEP Predicted GO
BP GO:1901616 organic hydroxy compound catabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR004776 Mem_trans 10 417
No external refs found!